Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.76□□□□□ -1.65
DDX56Q9NY93 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.76□□□□□ -1.65
DDX56Q9NY93 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.76□□□□□ -1.65
DDX56Q9NY93 AC009812.4-201ENST00000569134 1805 ntBASIC4.76□□□□□ -1.65
DDX56Q9NY93 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.76□□□□□ -1.65
DDX56Q9NY93 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
DDX56Q9NY93 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.76□□□□□ -1.65
DDX56Q9NY93 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
DDX56Q9NY93 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
DDX56Q9NY93 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
DDX56Q9NY93 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
DDX56Q9NY93 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
DDX56Q9NY93 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
DDX56Q9NY93 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
DDX56Q9NY93 DEFB108F-201ENST00000344638 222 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 RNU6-76P-201ENST00000384060 104 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
DDX56Q9NY93 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
DDX56Q9NY93 AL645733.1-201ENST00000402250 217 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 HDGFP1-201ENST00000405943 252 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 AC007899.1-201ENST00000412776 775 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.75□□□□□ -1.65
DDX56Q9NY93 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
DDX56Q9NY93 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.75□□□□□ -1.65
DDX56Q9NY93 PDSS1P1-201ENST00000422953 1114 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.75□□□□□ -1.65
DDX56Q9NY93 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.75□□□□□ -1.65
DDX56Q9NY93 HMGB1P12-201ENST00000438594 598 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 AC091685.2-201ENST00000454924 864 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 RPS4XP13-201ENST00000483219 789 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 AC083982.1-201ENST00000485679 344 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 NIPA2P2-201ENST00000496376 1083 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
DDX56Q9NY93 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.75□□□□□ -1.65
DDX56Q9NY93 Y_RNA.672-201ENST00000516289 104 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 SCARNA21.2-201ENST00000516600 166 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.75□□□□□ -1.65
DDX56Q9NY93 AL133153.1-201ENST00000557756 303 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 AC008277.2-201ENST00000605196 797 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 AC091979.2-201ENST00000607514 214 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 AP002360.3-201ENST00000607673 710 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 AC133644.2-201ENST00000608142 540 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 AC004067.1-201ENST00000608733 700 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 AP002826.1-201ENST00000608835 315 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
DDX56Q9NY93 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 MIR7155-201ENST00000615925 56 ntBASIC4.75□□□□□ -1.65
DDX56Q9NY93 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
DDX56Q9NY93 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
DDX56Q9NY93 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.75□□□□□ -1.65
DDX56Q9NY93 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 AC139769.1-204ENST00000472297 1931 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
DDX56Q9NY93 AC007685.1-201ENST00000329806 452 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 RNU5E-8P-201ENST00000363502 116 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 RNU1-63P-201ENST00000383902 164 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 MIR105-2-201ENST00000385083 81 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 HSPE1P26-201ENST00000405341 275 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
DDX56Q9NY93 PPP1R11P2-201ENST00000423543 382 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 MTATP6P4-201ENST00000427725 675 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 AL589823.1-201ENST00000429577 183 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
DDX56Q9NY93 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 ELOCP30-201ENST00000447108 299 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 AC108860.1-201ENST00000484521 383 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 AC109464.2-201ENST00000510242 943 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 ERHP1-201ENST00000523006 310 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 IGKV2D-19-201ENST00000523346 262 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 DEFB108A-201ENST00000530110 222 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 UBE2FP2-201ENST00000566646 462 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 AC091042.1-201ENST00000579213 173 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 RN7SL176P-201ENST00000580352 264 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 BPIFA4P-203ENST00000603168 689 ntBASIC4.74□□□□□ -1.65
DDX56Q9NY93 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.74□□□□□ -1.65
DDX56Q9NY93 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
DDX56Q9NY93 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
DDX56Q9NY93 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
DDX56Q9NY93 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 295.3 ms