Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC015726.3-201ENST00000624501 418 ntBASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
KIAA1549Q9HCM3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 RPL9P7-201ENST00000330965 580 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 MTND2P16-201ENST00000419987 799 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AL606490.7-201ENST00000433136 191 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 RPL23AP33-201ENST00000442301 452 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 RPL23AP15-201ENST00000450202 459 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 HSPE1P6-201ENST00000479457 291 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AC104687.1-201ENST00000485829 412 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AC021087.2-201ENST00000504656 1203 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AC113398.2-201ENST00000507630 558 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 RNU2-58P-201ENST00000516403 183 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AC128657.1-201ENST00000549459 145 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AC103810.6-201ENST00000606708 136 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 Z99129.2-201ENST00000619967 314 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AC009487.2-201ENST00000420969 6821 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AC233263.6-201ENST00000631132 1963 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AC092447.7-201ENST00000422212 1621 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AC069528.2-201ENST00000624849 1991 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 SNORA70B-201ENST00000384210 135 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AL035407.1-201ENST00000429211 571 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 RPS7P5-201ENST00000441482 581 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 BUD31P2-201ENST00000449374 300 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 EEF1B2P7-201ENST00000451177 676 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AP001960.1-201ENST00000506494 658 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 ACTR6P1-201ENST00000514311 1104 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 HMGB1P41-201ENST00000520234 440 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 CKS1BP7-201ENST00000522230 235 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 OR4A45P-201ENST00000529954 901 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 OR4T1P-201ENST00000554933 911 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 AC064859.1-201ENST00000624741 174 ntBASIC2.27□□□□□ -2.05
KIAA1549Q9HCM3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 MIR518C-201ENST00000384822 101 ntBASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 AL162578.1-201ENST00000406202 378 ntBASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 OOSP1P1-201ENST00000423265 274 ntBASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 NANOGP5-201ENST00000424456 877 ntBASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 AC008481.1-201ENST00000463278 396 ntBASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 RPL37P6-202ENST00000464216 403 ntBASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 ATG10-AS1-201ENST00000504846 648 ntBASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 AP001207.1-201ENST00000524051 481 ntBASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 OR7K1P-201ENST00000546439 926 ntBASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 AP001180.3-201ENST00000582221 145 ntBASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 AC007621.1-201ENST00000604544 437 ntBASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.26□□□□□ -2.05
KIAA1549Q9HCM3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 RNVU1-3-201ENST00000364313 161 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 RPS4XP7-201ENST00000406274 780 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 RPS12P2-201ENST00000439728 269 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 COX6CP2-201ENST00000444980 225 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 AC233982.1-201ENST00000451247 436 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 GSTA11P-201ENST00000452866 669 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 RPL5P13-201ENST00000462840 709 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 RPL7P5-201ENST00000471472 736 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 AC010620.2-201ENST00000600135 313 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms