Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.74□□□□□ -2.13
LIMD2Q9BT23 RN7SKP40-201ENST00000517211 242 ntBASIC1.74□□□□□ -2.13
LIMD2Q9BT23 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.74□□□□□ -2.13
LIMD2Q9BT23 AC022690.1-201ENST00000526681 550 ntBASIC1.74□□□□□ -2.13
LIMD2Q9BT23 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC1.74□□□□□ -2.13
LIMD2Q9BT23 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC1.74□□□□□ -2.13
LIMD2Q9BT23 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.74□□□□□ -2.13
LIMD2Q9BT23 MIR5004-201ENST00000579078 107 ntBASIC1.74□□□□□ -2.13
LIMD2Q9BT23 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC1.74□□□□□ -2.13
LIMD2Q9BT23 OR4G1P-201ENST00000588632 938 ntBASIC1.74□□□□□ -2.13
LIMD2Q9BT23 AC008687.2-201ENST00000597865 520 ntBASIC1.74□□□□□ -2.13
LIMD2Q9BT23 BNIP3P11-201ENST00000603878 563 ntBASIC1.74□□□□□ -2.13
LIMD2Q9BT23 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.74□□□□□ -2.13
LIMD2Q9BT23 AL159169.3-201ENST00000608871 561 ntBASIC1.74□□□□□ -2.13
LIMD2Q9BT23 AC008083.4-201ENST00000615076 444 ntBASIC1.74□□□□□ -2.13
LIMD2Q9BT23 AL138880.2-201ENST00000616214 239 ntBASIC1.74□□□□□ -2.13
LIMD2Q9BT23 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
LIMD2Q9BT23 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.74□□□□□ -2.13
LIMD2Q9BT23 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
LIMD2Q9BT23 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.74□□□□□ -2.13
LIMD2Q9BT23 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LIMD2Q9BT23 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
LIMD2Q9BT23 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 PABPC1P9-201ENST00000426076 1612 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AL645568.2-201ENST00000432815 1337 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AL512646.1-201ENST00000269395 1077 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AL139276.1-201ENST00000311910 1001 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 OR6K3-202ENST00000368146 996 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 MIR181B1-201ENST00000385240 110 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 MIR670-201ENST00000390142 98 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 SNORD67-201ENST00000390833 111 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 RNA5SP56-201ENST00000410277 118 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 RNA5SP120-201ENST00000410900 112 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 RNU2-25P-201ENST00000411041 191 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AL451074.5-201ENST00000415894 435 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 KRR1P1-201ENST00000419430 803 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AL606495.1-201ENST00000422100 813 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 SUMO1P4-201ENST00000429430 302 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 RPS20P5-201ENST00000434808 360 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 CR769767.1-201ENST00000436337 346 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 MTCO3P17-201ENST00000443775 513 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 RPS26P56-201ENST00000444468 240 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 snoU13.4-201ENST00000458916 104 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 HMGN1P8-201ENST00000463578 288 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 FTH1P2-201ENST00000466086 412 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AC091153.1-201ENST00000466297 402 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 RPS17P11-201ENST00000474297 293 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 RN7SL297P-201ENST00000483161 293 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 RN7SL20P-201ENST00000488827 297 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AC074250.1-201ENST00000511117 192 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 SNORA9.3-201ENST00000516383 129 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 SNORA31.11-201ENST00000516528 139 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AC087808.1-201ENST00000520501 361 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 MYL12BP1-201ENST00000569826 507 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 RPL23AP78-201ENST00000599928 470 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AC138473.1-201ENST00000605717 526 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AC092650.2-201ENST00000619984 902 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AC026241.1-201ENST00000517873 2142 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 AC090740.1-201ENST00000623193 2262 ntBASIC1.73□□□□□ -2.13
LIMD2Q9BT23 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC1.73□□□□□ -2.13
LIMD2Q9BT23 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC096644.4-201ENST00000563417 2912 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 MIR6073-201ENST00000352083 89 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 RNU6-386P-201ENST00000362650 107 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AL138885.1-201ENST00000405921 675 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 RNA5SP38-201ENST00000410750 119 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AL645937.1-202ENST00000421799 937 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC104978.1-201ENST00000449387 391 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms