Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 MIR708-201ENST00000390708 88 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VRK1Q99986 AL109941.1-201ENST00000401925 229 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 Z97832.1-201ENST00000402490 328 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 RN7SKP285-201ENST00000410137 318 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 RNU4-78P-201ENST00000410940 126 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.36□□□□□ -1.71
VRK1Q99986 HMGB3P20-201ENST00000417997 600 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.36□□□□□ -1.71
VRK1Q99986 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.36□□□□□ -1.71
VRK1Q99986 AC016712.1-201ENST00000431088 378 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.36□□□□□ -1.71
VRK1Q99986 MTCO3P18-201ENST00000440206 761 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 AC010655.1-201ENST00000449336 292 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.36□□□□□ -1.71
VRK1Q99986 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.36□□□□□ -1.71
VRK1Q99986 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.36□□□□□ -1.71
VRK1Q99986 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.36□□□□□ -1.71
VRK1Q99986 AC092989.1-201ENST00000481235 277 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 FCF1P3-201ENST00000496394 590 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 AC020893.1-201ENST00000502452 580 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VRK1Q99986 AC140172.1-201ENST00000502928 141 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.36□□□□□ -1.71
VRK1Q99986 AC021146.1-201ENST00000511202 716 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 AC105914.1-201ENST00000511798 226 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 AC090572.1-201ENST00000519251 160 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.36□□□□□ -1.71
VRK1Q99986 AC109635.3-201ENST00000529536 185 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.36□□□□□ -1.71
VRK1Q99986 AC118273.2-201ENST00000532092 465 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 AP000857.1-201ENST00000532151 543 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.36□□□□□ -1.71
VRK1Q99986 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.36□□□□□ -1.71
VRK1Q99986 HMGB3P26-201ENST00000560051 582 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.36□□□□□ -1.71
VRK1Q99986 AC025678.1-201ENST00000567861 338 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 MIR4700-201ENST00000578311 74 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 MIR4480-201ENST00000582492 71 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.36□□□□□ -1.71
VRK1Q99986 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.36□□□□□ -1.71
VRK1Q99986 RPL26P30-202ENST00000602923 645 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 AC006254.3-201ENST00000603353 884 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.36□□□□□ -1.71
VRK1Q99986 AC002553.4-201ENST00000616896 331 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 AC139792.3-201ENST00000623525 224 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.36□□□□□ -1.71
VRK1Q99986 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.36□□□□□ -1.71
VRK1Q99986 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.36□□□□□ -1.71
VRK1Q99986 MTND5P3-201ENST00000438536 1800 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VRK1Q99986 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VRK1Q99986 SALL4P2-201ENST00000423288 2910 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.36□□□□□ -1.71
VRK1Q99986 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VRK1Q99986 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VRK1Q99986 INTS6P1-201ENST00000504674 2530 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VRK1Q99986 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
VRK1Q99986 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
VRK1Q99986 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.35□□□□□ -1.71
VRK1Q99986 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.35□□□□□ -1.71
VRK1Q99986 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.35□□□□□ -1.71
VRK1Q99986 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VRK1Q99986 RNU1-94P-201ENST00000362627 173 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 RNY3P13-201ENST00000365542 102 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VRK1Q99986 Y_RNA.409-201ENST00000383990 98 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 RNU6-780P-201ENST00000391030 104 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 RNU11-4P-201ENST00000391149 133 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 RNU6-754P-201ENST00000391166 107 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VRK1Q99986 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.35□□□□□ -1.71
VRK1Q99986 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.35□□□□□ -1.71
VRK1Q99986 USP9YP6-201ENST00000413550 854 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 RPS7P15-201ENST00000415804 584 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.35□□□□□ -1.71
VRK1Q99986 OR1AA1P-201ENST00000419597 916 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 RPL23AP38-201ENST00000423801 469 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 AC007283.2-201ENST00000424739 197 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.35□□□□□ -1.71
VRK1Q99986 RPL35AP22-201ENST00000436855 335 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.35□□□□□ -1.71
VRK1Q99986 NANOGP10-201ENST00000453325 895 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 AC108161.1-201ENST00000461060 402 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 AC091180.1-201ENST00000462104 372 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 RPS3AP41-201ENST00000462701 778 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.35□□□□□ -1.71
VRK1Q99986 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.35□□□□□ -1.71
VRK1Q99986 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.35□□□□□ -1.71
VRK1Q99986 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.35□□□□□ -1.71
VRK1Q99986 COX6B1P5-201ENST00000509843 249 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.35□□□□□ -1.71
VRK1Q99986 RNA5SP249-201ENST00000516127 99 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 AC103783.1-201ENST00000520506 373 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.35□□□□□ -1.71
VRK1Q99986 AL512360.1-201ENST00000555346 234 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 AL359212.1-201ENST00000556608 614 ntBASIC4.35□□□□□ -1.71
VRK1Q99986 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms