Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 FO393414.1-201ENST00000428697 1184 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.24□□□□□ -1.89
NPAS2Q99743 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.24□□□□□ -1.89
NPAS2Q99743 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.24□□□□□ -1.89
NPAS2Q99743 MTND2P19-201ENST00000449129 1012 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.24□□□□□ -1.89
NPAS2Q99743 RPL21P18-201ENST00000469899 480 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 RPL23AP44-201ENST00000482216 473 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 AL358832.1-201ENST00000497800 389 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 AC093767.1-201ENST00000504523 156 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.24□□□□□ -1.89
NPAS2Q99743 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.24□□□□□ -1.89
NPAS2Q99743 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.24□□□□□ -1.89
NPAS2Q99743 RPL12P22-201ENST00000519073 490 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NPAS2Q99743 AC010198.2-201ENST00000550612 259 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.24□□□□□ -1.89
NPAS2Q99743 MIR5186-201ENST00000577504 120 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.24□□□□□ -1.89
NPAS2Q99743 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.24□□□□□ -1.89
NPAS2Q99743 SNORD84-203ENST00000584275 78 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.24□□□□□ -1.89
NPAS2Q99743 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.24□□□□□ -1.89
NPAS2Q99743 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.24□□□□□ -1.89
NPAS2Q99743 AL159169.3-201ENST00000608871 561 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 VN1R7P-201ENST00000619242 903 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 AC068880.4-201ENST00000623082 495 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 AC026634.1-201ENST00000634369 198 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
NPAS2Q99743 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.24□□□□□ -1.89
NPAS2Q99743 AL049780.3-201ENST00000624612 1583 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NPAS2Q99743 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NPAS2Q99743 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
NPAS2Q99743 AC093908.1-201ENST00000623125 8092 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NPAS2Q99743 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
NPAS2Q99743 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.23□□□□□ -1.89
NPAS2Q99743 RNU6-525P-201ENST00000363685 104 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.23□□□□□ -1.89
NPAS2Q99743 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
NPAS2Q99743 AC234772.1-201ENST00000377927 937 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 SNORA9-201ENST00000384215 133 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 SNORA40.4-201ENST00000390971 128 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.23□□□□□ -1.89
NPAS2Q99743 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.23□□□□□ -1.89
NPAS2Q99743 HMGB3P23-201ENST00000414981 585 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.23□□□□□ -1.89
NPAS2Q99743 MTCYBP15-201ENST00000433123 1127 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 snoU109.4-201ENST00000458953 143 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.23□□□□□ -1.89
NPAS2Q99743 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.23□□□□□ -1.89
NPAS2Q99743 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.23□□□□□ -1.89
NPAS2Q99743 PHBP14-201ENST00000512887 367 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 AC093331.1-201ENST00000521474 169 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.23□□□□□ -1.89
NPAS2Q99743 AC018630.1-201ENST00000541376 925 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.23□□□□□ -1.89
NPAS2Q99743 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.23□□□□□ -1.89
NPAS2Q99743 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.23□□□□□ -1.89
NPAS2Q99743 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.23□□□□□ -1.89
NPAS2Q99743 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.23□□□□□ -1.89
NPAS2Q99743 AP001542.2-201ENST00000593141 364 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 AL031985.2-201ENST00000600955 480 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 AL109653.1-201ENST00000603091 248 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 AL365400.2-201ENST00000605604 902 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 MIR7851-201ENST00000610611 160 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 AL110115.1-201ENST00000614396 364 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 AC091953.5-201ENST00000622919 233 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 AC040168.1-201ENST00000623594 991 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 AL645937.1-201ENST00000641739 1652 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.23□□□□□ -1.89
NPAS2Q99743 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NPAS2Q99743 AF117829.1-206ENST00000621883 3802 ntBASIC3.23□□□□□ -1.89
NPAS2Q99743 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
NPAS2Q99743 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.22□□□□□ -1.89
NPAS2Q99743 AC118273.1-201ENST00000525324 3006 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 SNORA51.6-201ENST00000384151 125 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 U3.29-201ENST00000391296 212 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.22□□□□□ -1.89
NPAS2Q99743 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.22□□□□□ -1.89
NPAS2Q99743 AC027644.1-201ENST00000419595 298 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 AC005300.1-201ENST00000428401 373 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.22□□□□□ -1.89
NPAS2Q99743 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
NPAS2Q99743 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 AC096751.1-202ENST00000502691 1067 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
NPAS2Q99743 AC084024.2-201ENST00000503480 791 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 KLRA1P-201ENST00000503499 986 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 AC026414.1-201ENST00000504046 698 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 KCTD9P5-201ENST00000504141 1170 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 BOLA3P3-201ENST00000505182 232 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 RNU5A-7P-201ENST00000515979 116 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 IGKV2-26-201ENST00000518305 343 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.22□□□□□ -1.89
NPAS2Q99743 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.22□□□□□ -1.89
NPAS2Q99743 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.22□□□□□ -1.89
NPAS2Q99743 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.22□□□□□ -1.89
NPAS2Q99743 EEF1B2P4-201ENST00000551398 348 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms