Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 RNA5SP307-201ENST00000362863 116 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 RNU6-730P-201ENST00000383954 104 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 RNU6-1119P-201ENST00000384349 108 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 Y_RNA.505-201ENST00000384489 102 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 U8.11-201ENST00000384699 133 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 U8.12-201ENST00000384701 133 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 MIR34B-201ENST00000385076 84 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 PTMAP5-201ENST00000393073 333 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 DEFB108C-201ENST00000400154 252 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 RN7SKP156-201ENST00000410308 342 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 RNU2-16P-201ENST00000410712 136 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 HSPE1P12-201ENST00000412576 301 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 Z74021.1-201ENST00000423610 407 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 PSMA6P3-201ENST00000428242 164 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 NMNAT1P2-201ENST00000435192 860 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 SKP1P1-201ENST00000438081 489 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 RPL23AP46-201ENST00000438548 490 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 PDSS1P2-201ENST00000449397 678 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 U8.18-201ENST00000459285 133 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 OR9M1P-201ENST00000459641 921 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AC022795.1-201ENST00000473808 480 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 RPS29P19-201ENST00000479709 171 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 ARL2BPP4-201ENST00000506854 471 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AL139174.1-201ENST00000531489 886 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AC024224.1-201ENST00000538284 609 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AL391156.1-201ENST00000554965 554 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AC087683.1-201ENST00000591187 441 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AC068790.6-201ENST00000602558 258 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AC078795.2-201ENST00000602835 1252 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AC008966.2-201ENST00000606157 453 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 FP236240.3-201ENST00000623061 327 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AC007546.2-201ENST00000623996 360 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 AL034408.1-202ENST00000636088 415 ntBASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
TRIM43Q96BQ3 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AC107068.1-201ENST00000563286 4218 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AC073346.2-201ENST00000624724 2058 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AC000374.1-201ENST00000434698 1745 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 MTND4P26-201ENST00000415971 1359 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AC018529.3-201ENST00000624212 2254 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AL161781.1-201ENST00000354277 403 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 RNU1-83P-201ENST00000363426 164 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 RNU6-744P-201ENST00000365557 107 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 RNU6-1316P-201ENST00000384242 108 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 RNU6-769P-201ENST00000384407 104 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 MT-TC-201ENST00000387405 66 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AL031779.1-201ENST00000415663 330 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 OFD1P18Y-201ENST00000420889 959 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AL590233.1-201ENST00000430017 456 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AC109583.1-201ENST00000432156 268 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 CYCSP43-201ENST00000438233 310 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 MTND1P34-201ENST00000438556 671 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 SDCBPP1-201ENST00000440192 890 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms