Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NEDD1Q8NHV4 AC090017.1-201ENST00000548612 1779 ntBASIC6.07□□□□□ -1.44
NEDD1Q8NHV4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.07□□□□□ -1.44
NEDD1Q8NHV4 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.07□□□□□ -1.44
NEDD1Q8NHV4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NEDD1Q8NHV4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NEDD1Q8NHV4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NEDD1Q8NHV4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NEDD1Q8NHV4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NEDD1Q8NHV4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 AC004656.1-201ENST00000568479 4951 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 PROS2P-201ENST00000474651 1951 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 Y_RNA.210-201ENST00000364161 110 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 RNU4-48P-201ENST00000365559 182 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 RNU6-657P-201ENST00000383904 107 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 RNU6-125P-201ENST00000384505 107 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 AL078599.1-201ENST00000402075 293 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 RN7SKP114-201ENST00000410327 279 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 RN7SKP125-201ENST00000410481 302 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 RPL7P4-203ENST00000430239 730 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 RPL7P5-201ENST00000471472 736 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 AC126389.1-201ENST00000477436 290 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 RPL5P22-201ENST00000480199 884 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 Y_RNA.673-201ENST00000516306 88 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 SNORD27.1-201ENST00000516319 72 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 RNU7-51P-201ENST00000516560 62 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 RNU6-714P-201ENST00000516963 103 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 RNU6-111P-201ENST00000517179 105 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 AP001284.1-201ENST00000528393 2118 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 OR4P1P-201ENST00000530808 1136 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 AP003385.6-201ENST00000531603 374 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 RNF138P2-201ENST00000603490 592 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 AL354984.3-201ENST00000604803 325 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 AC093799.2-201ENST00000610062 578 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 AL627230.1-201ENST00000613077 211 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 AL591926.8-201ENST00000616876 211 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 MIR6730-201ENST00000622213 67 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NEDD1Q8NHV4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 Y_RNA.106-201ENST00000363189 100 ntBASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 Y_RNA.378-201ENST00000365652 113 ntBASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 RNU6-886P-201ENST00000384319 105 ntBASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 RNU6-952P-201ENST00000391164 108 ntBASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 RNU6-903P-201ENST00000391270 109 ntBASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 RNA5SP241-201ENST00000391326 114 ntBASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 RPS15AP10-201ENST00000432472 382 ntBASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 AC119618.1-201ENST00000434191 222 ntBASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 RPL12P3-201ENST00000440080 396 ntBASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 AC020550.1-201ENST00000447385 163 ntBASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 Y_RNA.703-201ENST00000516846 111 ntBASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 AC090312.1-201ENST00000580637 348 ntBASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 IGHV3-29-201ENST00000604817 344 ntBASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 EIF3FP1-201ENST00000613970 806 ntBASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.05□□□□□ -1.44
NEDD1Q8NHV4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.04□□□□□ -1.44
NEDD1Q8NHV4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms