Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AL138713.1-201ENST00000624026 2130 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC004972.1-201ENST00000623934 2209 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 Y_RNA.132-201ENST00000363421 102 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 SNORA62.1-201ENST00000364287 154 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 RNU6-641P-201ENST00000384006 107 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 SNORA16A-201ENST00000384342 137 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 RNU6-831P-201ENST00000384548 107 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 RNU6-278P-201ENST00000390945 109 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 SNORA68.2-201ENST00000391263 128 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AL583835.1-201ENST00000399570 407 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 HMGN1P24-201ENST00000412282 298 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 MTATP6P16-201ENST00000434543 526 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 SUMO2P3-201ENST00000438311 288 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 RNU7-182P-201ENST00000459009 62 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 MTND4P17-201ENST00000470444 350 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC022034.3-201ENST00000471393 478 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 OR2AO1P-201ENST00000476497 403 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 HMGB1P21-201ENST00000502313 581 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC110792.2-201ENST00000510278 224 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC114781.3-201ENST00000512083 142 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 Y_RNA.665-201ENST00000516177 98 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 RN7SKP219-201ENST00000516825 296 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC103843.2-201ENST00000530523 682 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC020661.2-201ENST00000560114 134 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AL008729.2-201ENST00000606393 473 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AL022345.1-201ENST00000607292 135 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC004908.2-201ENST00000609090 574 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 MIR6839-201ENST00000620425 113 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC099494.2-201ENST00000623371 978 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC073869.10-201ENST00000642016 354 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 AC009229.4-201ENST00000623854 1947 ntBASIC4.63□□□□□ -1.67
DTX3Q8N9I9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.63□□□□□ -1.67
DTX3Q8N9I9 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.62□□□□□ -1.67
DTX3Q8N9I9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 OR14L1P-202ENST00000641545 3009 ntBASIC4.62□□□□□ -1.67
DTX3Q8N9I9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 HSPE1P11-201ENST00000339579 310 ntBASIC4.62□□□□□ -1.67
DTX3Q8N9I9 RNU1-19P-201ENST00000363306 165 ntBASIC4.62□□□□□ -1.67
DTX3Q8N9I9 Y_RNA.259-201ENST00000364619 101 ntBASIC4.62□□□□□ -1.67
DTX3Q8N9I9 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 OR4K12P-201ENST00000406538 961 ntBASIC4.62□□□□□ -1.67
DTX3Q8N9I9 AL606923.1-201ENST00000406616 190 ntBASIC4.62□□□□□ -1.67
DTX3Q8N9I9 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 AC104333.2-201ENST00000422630 192 ntBASIC4.62□□□□□ -1.67
DTX3Q8N9I9 OR2AH1P-201ENST00000425717 928 ntBASIC4.62□□□□□ -1.67
DTX3Q8N9I9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.62□□□□□ -1.67
DTX3Q8N9I9 SNORD121B-201ENST00000458838 81 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms