Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL139156.1-201ENST00000412785 841 ntBASIC3.43□□□□□ -1.86
VPS8Q8N3P4 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS8Q8N3P4 snoU13.26-201ENST00000459452 105 ntBASIC3.43□□□□□ -1.86
VPS8Q8N3P4 AC104090.1-201ENST00000506341 1171 ntBASIC3.43□□□□□ -1.86
VPS8Q8N3P4 AC087241.2-201ENST00000535801 324 ntBASIC3.43□□□□□ -1.86
VPS8Q8N3P4 MIR4648-201ENST00000580107 72 ntBASIC3.43□□□□□ -1.86
VPS8Q8N3P4 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.43□□□□□ -1.86
VPS8Q8N3P4 AL359757.2-201ENST00000624309 274 ntBASIC3.43□□□□□ -1.86
VPS8Q8N3P4 CR382285.2-201ENST00000624662 1495 ntBASIC3.43□□□□□ -1.86
VPS8Q8N3P4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS8Q8N3P4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS8Q8N3P4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS8Q8N3P4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS8Q8N3P4 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
VPS8Q8N3P4 RPL5P19-201ENST00000404228 893 ntBASIC3.42□□□□□ -1.86
VPS8Q8N3P4 BTBD10P2-201ENST00000404779 676 ntBASIC3.42□□□□□ -1.86
VPS8Q8N3P4 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS8Q8N3P4 OR4G11P-201ENST00000492842 939 ntBASIC3.42□□□□□ -1.86
VPS8Q8N3P4 AC008716.1-201ENST00000511084 513 ntBASIC3.42□□□□□ -1.86
VPS8Q8N3P4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS8Q8N3P4 IGKV2-36-201ENST00000519999 223 ntBASIC3.42□□□□□ -1.86
VPS8Q8N3P4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS8Q8N3P4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS8Q8N3P4 AP000787.2-201ENST00000604432 568 ntBASIC3.42□□□□□ -1.86
VPS8Q8N3P4 AC012531.5-201ENST00000611375 151 ntBASIC3.42□□□□□ -1.86
VPS8Q8N3P4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.42□□□□□ -1.86
VPS8Q8N3P4 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS8Q8N3P4 ZNF355P-201ENST00000427301 3216 ntBASIC3.42□□□□□ -1.86
VPS8Q8N3P4 SYT14P1-202ENST00000600441 1448 ntBASIC3.41□□□□□ -1.86
VPS8Q8N3P4 U3.15-201ENST00000365398 212 ntBASIC3.41□□□□□ -1.86
VPS8Q8N3P4 AC007390.1-201ENST00000415722 356 ntBASIC3.41□□□□□ -1.86
VPS8Q8N3P4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS8Q8N3P4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS8Q8N3P4 AL118520.1-201ENST00000450770 291 ntBASIC3.41□□□□□ -1.86
VPS8Q8N3P4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS8Q8N3P4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS8Q8N3P4 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS8Q8N3P4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS8Q8N3P4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VPS8Q8N3P4 AC006378.2-201ENST00000623178 2476 ntBASIC3.41□□□□□ -1.86
VPS8Q8N3P4 XKRY2-202ENST00000623874 1581 ntBASIC3.4□□□□□ -1.86
VPS8Q8N3P4 XKRY-202ENST00000624960 1581 ntBASIC3.4□□□□□ -1.86
VPS8Q8N3P4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
VPS8Q8N3P4 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
VPS8Q8N3P4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
VPS8Q8N3P4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
VPS8Q8N3P4 OR56A5-201ENST00000340110 738 ntBASIC3.4□□□□□ -1.87
VPS8Q8N3P4 U8.9-201ENST00000365667 134 ntBASIC3.4□□□□□ -1.87
VPS8Q8N3P4 SNORA48.3-201ENST00000391081 134 ntBASIC3.4□□□□□ -1.87
VPS8Q8N3P4 RNU6-603P-201ENST00000411403 107 ntBASIC3.4□□□□□ -1.87
VPS8Q8N3P4 AL590103.1-201ENST00000434488 307 ntBASIC3.4□□□□□ -1.87
VPS8Q8N3P4 AL353093.1-201ENST00000441292 436 ntBASIC3.4□□□□□ -1.87
VPS8Q8N3P4 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.4□□□□□ -1.87
VPS8Q8N3P4 FDX1P2-201ENST00000450769 375 ntBASIC3.4□□□□□ -1.87
VPS8Q8N3P4 AC106872.3-201ENST00000495104 446 ntBASIC3.4□□□□□ -1.87
VPS8Q8N3P4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS8Q8N3P4 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS8Q8N3P4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS8Q8N3P4 SNORD39.2-201ENST00000579995 76 ntBASIC3.4□□□□□ -1.87
VPS8Q8N3P4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.4□□□□□ -1.87
VPS8Q8N3P4 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS8Q8N3P4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS8Q8N3P4 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS8Q8N3P4 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS8Q8N3P4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS8Q8N3P4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS8Q8N3P4 RNU2-2P-201ENST00000410396 191 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 AC092832.1-201ENST00000422934 400 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS8Q8N3P4 AL353705.4-201ENST00000449661 238 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS8Q8N3P4 AP000873.5-201ENST00000533906 236 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 BDH2P1-201ENST00000602288 736 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS8Q8N3P4 U2.15-201ENST00000611544 191 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS8Q8N3P4 U2.16-201ENST00000613119 191 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 U2.12-201ENST00000613778 191 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 U2.20-201ENST00000613956 192 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 U2.9-201ENST00000615427 191 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 U2.11-201ENST00000616345 191 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 U2.2-201ENST00000616535 191 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 U2.3-201ENST00000617785 191 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 U2.19-201ENST00000618602 191 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 RNU2-1-201ENST00000618664 191 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 U2.6-201ENST00000619225 191 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 AC010378.1-201ENST00000619270 362 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 U2.5-201ENST00000619465 191 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 U2.10-201ENST00000620268 191 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 MIR6873-201ENST00000622788 63 ntBASIC3.39□□□□□ -1.87
VPS8Q8N3P4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS8Q8N3P4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS8Q8N3P4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS8Q8N3P4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS8Q8N3P4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS8Q8N3P4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS8Q8N3P4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
VPS8Q8N3P4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS8Q8N3P4 RNU1-91P-201ENST00000364746 163 ntBASIC3.38□□□□□ -1.87
VPS8Q8N3P4 RNU4-26P-201ENST00000410270 107 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms