Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC231657.1-201ENST00000624313 397 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC079228.1-201ENST00000624774 1049 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 FAM157B-203ENST00000639350 358 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 ZNF833P-201ENST00000424938 1494 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AC066616.2-201ENST00000559334 1481 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AC130650.2-201ENST00000618736 2403 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 MIR208A-201ENST00000362287 71 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 RNU6-462P-201ENST00000362659 105 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 RNU6-433P-201ENST00000363216 104 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 RNA5SP88-201ENST00000365560 109 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 MIR30B-201ENST00000384850 88 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 ARF4P3-201ENST00000397387 509 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 RPS3AP26-201ENST00000398259 784 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AC069218.2-201ENST00000411665 344 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 RPL31P2-201ENST00000413849 377 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AC016907.1-201ENST00000419483 435 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AC129850.1-201ENST00000436203 508 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 RPS11P1-201ENST00000451072 473 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AC104073.1-201ENST00000451988 151 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 RNA5SP216-201ENST00000516111 123 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AC104986.1-201ENST00000517978 436 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AC087276.1-201ENST00000529659 480 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 RPL23AP87-202ENST00000573039 466 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 MIR3944-201ENST00000581277 108 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 AF131215.7-201ENST00000602443 707 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 RNU6-88P-201ENST00000606801 100 ntBASIC4.31□□□□□ -1.72
VPS52Q8N1B4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS52Q8N1B4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 SNORD35B-201ENST00000363660 87 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 Y_RNA.201-201ENST00000364052 96 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 RNA5SP387-201ENST00000364226 106 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 SNORA73.2-201ENST00000364946 201 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 Y_RNA.318-201ENST00000365131 97 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 SSXP10-201ENST00000402595 565 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 RN7SKP156-201ENST00000410308 342 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 NPM1P11-201ENST00000417106 855 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 NPM1P34-201ENST00000428821 893 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 YME1L1P1-201ENST00000429435 297 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 TPTE2P5-203ENST00000458118 728 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 RPL7P15-201ENST00000461190 712 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 MTND4LP3-201ENST00000468320 276 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 RAP1BP2-201ENST00000478270 544 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 RN7SL323P-201ENST00000494712 295 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 AC080014.1-201ENST00000496877 1201 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 OR2A20P-203ENST00000498397 1268 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 RNF138P1-201ENST00000502765 546 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 RNA5SP309-201ENST00000516670 106 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 NDUFA5P2-201ENST00000519723 344 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 AC091516.1-201ENST00000549191 703 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms