Protein–RNA interactions for Protein: Q8IWP9

CCDC28A, Coiled-coil domain-containing protein 28A, humanhuman

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28AQ8IWP9 AC011979.2-201ENST00000527568 352 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AP004607.2-201ENST00000533949 322 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 BNIP3P5-201ENST00000562290 498 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 MIR3167-201ENST00000579623 85 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AL590282.1-201ENST00000610379 1136 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC126175.1-201ENST00000617041 758 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC006338.1-201ENST00000618453 749 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AL158209.2-201ENST00000619266 216 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC243312.2-201ENST00000623340 601 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 SEPT14P19-203ENST00000633205 211 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 MIR4275-201ENST00000636486 87 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 OR5H6-203ENST00000642105 978 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AL157700.1-201ENST00000561973 1432 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 RNA5SP322-201ENST00000363617 119 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 SNORA7.2-201ENST00000364446 145 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 RNA5SP284-201ENST00000384547 118 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 HSPA8P15-201ENST00000401676 786 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 RPS3AP24-201ENST00000407896 734 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AC007283.2-201ENST00000424739 197 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 ISCA1P1-201ENST00000426679 387 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AC004866.2-201ENST00000438285 481 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 EEF1B2P6-201ENST00000445713 673 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 RPS24P6-201ENST00000452670 400 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 NANOGP10-201ENST00000453325 895 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AC126182.1-201ENST00000478134 357 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AC004924.1-201ENST00000480160 781 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AC068305.1-201ENST00000497406 726 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AC078918.1-201ENST00000498515 228 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 HMGB1P22-201ENST00000505315 124 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AC090151.1-201ENST00000520784 730 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 NRBF2P4-201ENST00000520874 850 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AC087477.6-201ENST00000559595 843 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AP001094.1-201ENST00000579805 193 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 MIR4505-201ENST00000582238 73 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AC011487.3-201ENST00000593607 453 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 BNIP3P33-201ENST00000598912 569 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AC012616.1-201ENST00000600294 197 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 RPL7P50-201ENST00000600588 727 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AC008814.1-201ENST00000603797 406 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AL022099.1-201ENST00000604551 712 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AL450472.3-201ENST00000615578 367 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 U6atac.1-201ENST00000616025 117 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 U4.5-201ENST00000617137 123 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AL691477.1-201ENST00000624398 162 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 AC124864.2-201ENST00000624736 186 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4□□□□□ -1.77
CCDC28AQ8IWP9 LRRC77P-213ENST00000637727 880 ntBASIC4□□□□□ -1.77
CCDC28AQ8IWP9 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms