Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.34□□□□□ -1.72
HERC6Q8IVU3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
HERC6Q8IVU3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC012020.1-201ENST00000624541 1728 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 RNU6-723P-201ENST00000383973 107 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 SNORA3.3-201ENST00000408712 125 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 RNU4-78P-201ENST00000410940 126 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 RNA5SP104-201ENST00000410989 118 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 RPS29P4-201ENST00000414733 161 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AL590233.1-201ENST00000430017 456 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 MUPP-201ENST00000438111 566 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 SDCBPP1-201ENST00000440192 890 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 MTATP6P26-201ENST00000445926 662 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AL121877.1-201ENST00000453704 622 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 MTCO3P16-201ENST00000454456 754 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 HMGB3P30-201ENST00000457863 606 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 RPL30P6-201ENST00000475925 342 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC006390.1-201ENST00000508068 283 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC074250.1-201ENST00000511117 192 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC024589.1-201ENST00000512207 263 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 RNA5SP179-201ENST00000517284 121 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC008802.1-201ENST00000519121 791 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 OR4P1P-201ENST00000530808 1136 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC024224.1-201ENST00000538284 609 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 OR7K1P-201ENST00000546439 926 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC090615.1-201ENST00000577519 154 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 ZNF415P1-201ENST00000582279 1166 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AL163642.2-201ENST00000604722 1019 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC114878.2-201ENST00000604863 1251 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC018714.1-201ENST00000605028 208 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC024560.3-201ENST00000608482 349 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC072039.2-201ENST00000608883 439 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC004223.4-201ENST00000612426 332 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AP000676.3-201ENST00000623299 569 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC009039.2-201ENST00000624524 529 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC127502.3-201ENST00000636170 1206 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 AC007671.2-201ENST00000637344 619 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 CRYM-AS1-204ENST00000637983 556 ntBASIC4.33□□□□□ -1.72
HERC6Q8IVU3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HERC6Q8IVU3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 AL022578.1-201ENST00000439330 1433 ntBASIC4.32□□□□□ -1.72
HERC6Q8IVU3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.32□□□□□ -1.72
HERC6Q8IVU3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 RPL23AP39-201ENST00000415533 405 ntBASIC4.32□□□□□ -1.72
HERC6Q8IVU3 RPS23P10-201ENST00000416185 486 ntBASIC4.32□□□□□ -1.72
HERC6Q8IVU3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 AC133473.1-201ENST00000455173 299 ntBASIC4.32□□□□□ -1.72
HERC6Q8IVU3 snoU13.3-201ENST00000459441 104 ntBASIC4.32□□□□□ -1.72
HERC6Q8IVU3 AP001992.1-205ENST00000462248 379 ntBASIC4.32□□□□□ -1.72
HERC6Q8IVU3 ST13P14-201ENST00000474095 734 ntBASIC4.32□□□□□ -1.72
HERC6Q8IVU3 AC025445.1-201ENST00000502728 300 ntBASIC4.32□□□□□ -1.72
HERC6Q8IVU3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 EEF1B2P4-201ENST00000551398 348 ntBASIC4.32□□□□□ -1.72
HERC6Q8IVU3 AC063950.1-201ENST00000552036 308 ntBASIC4.32□□□□□ -1.72
HERC6Q8IVU3 AC090888.1-201ENST00000561335 1141 ntBASIC4.32□□□□□ -1.72
HERC6Q8IVU3 CYP4A43P-201ENST00000568156 121 ntBASIC4.32□□□□□ -1.72
HERC6Q8IVU3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 AL109653.1-201ENST00000603091 248 ntBASIC4.32□□□□□ -1.72
HERC6Q8IVU3 AC091167.4-201ENST00000605079 184 ntBASIC4.32□□□□□ -1.72
HERC6Q8IVU3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 AC040168.1-201ENST00000623594 991 ntBASIC4.32□□□□□ -1.72
HERC6Q8IVU3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HERC6Q8IVU3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 332.3 ms