Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 MIR3074-201ENST00000384885 81 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 AL603865.2-201ENST00000401679 213 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 RNU2-21P-201ENST00000410368 188 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 RNU6-55P-201ENST00000411092 107 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 RNU6-954P-201ENST00000411355 107 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 RPL31P45-201ENST00000419532 356 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.13□□□□□ -1.75
NPHP3Q7Z494 AC004865.1-201ENST00000442276 1003 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 snoU13.7-201ENST00000459220 104 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.13□□□□□ -1.75
NPHP3Q7Z494 AC087385.1-201ENST00000475062 312 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 AP000926.1-201ENST00000479573 241 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 AC111000.2-201ENST00000507775 550 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NPHP3Q7Z494 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.13□□□□□ -1.75
NPHP3Q7Z494 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.13□□□□□ -1.75
NPHP3Q7Z494 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.13□□□□□ -1.75
NPHP3Q7Z494 EIF5A2P1-201ENST00000564027 460 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 CYCSP39-201ENST00000565821 309 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 AC010735.1-201ENST00000567305 1026 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.13□□□□□ -1.75
NPHP3Q7Z494 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.13□□□□□ -1.75
NPHP3Q7Z494 AC091488.1-201ENST00000604239 660 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.13□□□□□ -1.75
NPHP3Q7Z494 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.13□□□□□ -1.75
NPHP3Q7Z494 AC087241.4-201ENST00000612441 480 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 AL445984.1-201ENST00000637834 659 ntBASIC4.13□□□□□ -1.75
NPHP3Q7Z494 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPHP3Q7Z494 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.12□□□□□ -1.75
NPHP3Q7Z494 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.12□□□□□ -1.75
NPHP3Q7Z494 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPHP3Q7Z494 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NPHP3Q7Z494 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NPHP3Q7Z494 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NPHP3Q7Z494 AL672167.1-206ENST00000356293 943 ntBASIC4.12□□□□□ -1.75
NPHP3Q7Z494 UBE2V1P9-201ENST00000414760 368 ntBASIC4.12□□□□□ -1.75
NPHP3Q7Z494 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.12□□□□□ -1.75
NPHP3Q7Z494 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.12□□□□□ -1.75
NPHP3Q7Z494 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.12□□□□□ -1.75
NPHP3Q7Z494 AC092170.1-201ENST00000440211 356 ntBASIC4.12□□□□□ -1.75
NPHP3Q7Z494 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.12□□□□□ -1.75
NPHP3Q7Z494 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.12□□□□□ -1.75
NPHP3Q7Z494 SNORD108-201ENST00000459332 71 ntBASIC4.12□□□□□ -1.75
NPHP3Q7Z494 RPL21P103-201ENST00000479921 488 ntBASIC4.12□□□□□ -1.75
NPHP3Q7Z494 PRELID3BP7-201ENST00000503606 469 ntBASIC4.12□□□□□ -1.75
NPHP3Q7Z494 AC008885.2-201ENST00000509506 930 ntBASIC4.12□□□□□ -1.75
NPHP3Q7Z494 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.12□□□□□ -1.75
NPHP3Q7Z494 AP001636.2-201ENST00000525517 696 ntBASIC4.12□□□□□ -1.75
NPHP3Q7Z494 AL121652.1-201ENST00000608851 448 ntBASIC4.12□□□□□ -1.75
NPHP3Q7Z494 AC008121.2-201ENST00000614647 523 ntBASIC4.12□□□□□ -1.75
NPHP3Q7Z494 AC022079.2-201ENST00000619739 566 ntBASIC4.12□□□□□ -1.75
NPHP3Q7Z494 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.12□□□□□ -1.75
NPHP3Q7Z494 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.12□□□□□ -1.75
NPHP3Q7Z494 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
NPHP3Q7Z494 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPHP3Q7Z494 MIR525-201ENST00000384978 85 ntBASIC4.11□□□□□ -1.75
NPHP3Q7Z494 RNU6-932P-201ENST00000391108 106 ntBASIC4.11□□□□□ -1.75
NPHP3Q7Z494 AC092638.1-201ENST00000411966 1275 ntBASIC4.11□□□□□ -1.75
NPHP3Q7Z494 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.11□□□□□ -1.75
NPHP3Q7Z494 HMGB1P45-201ENST00000435986 653 ntBASIC4.11□□□□□ -1.75
NPHP3Q7Z494 FTH1P1-201ENST00000437933 532 ntBASIC4.11□□□□□ -1.75
NPHP3Q7Z494 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.11□□□□□ -1.75
NPHP3Q7Z494 OR51B8P-201ENST00000449892 769 ntBASIC4.11□□□□□ -1.75
NPHP3Q7Z494 AC008427.1-201ENST00000503102 655 ntBASIC4.11□□□□□ -1.75
NPHP3Q7Z494 SCGB1D5P-201ENST00000515134 247 ntBASIC4.11□□□□□ -1.75
NPHP3Q7Z494 RNU6-237P-201ENST00000515985 71 ntBASIC4.11□□□□□ -1.75
NPHP3Q7Z494 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.11□□□□□ -1.75
NPHP3Q7Z494 MTND2P26-201ENST00000528255 1029 ntBASIC4.11□□□□□ -1.75
NPHP3Q7Z494 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.11□□□□□ -1.75
NPHP3Q7Z494 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.11□□□□□ -1.75
NPHP3Q7Z494 AC074029.1-201ENST00000552531 1044 ntBASIC4.11□□□□□ -1.75
NPHP3Q7Z494 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.11□□□□□ -1.75
NPHP3Q7Z494 AC084824.4-201ENST00000620106 731 ntBASIC4.11□□□□□ -1.75
NPHP3Q7Z494 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NPHP3Q7Z494 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NPHP3Q7Z494 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
NPHP3Q7Z494 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPHP3Q7Z494 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.11□□□□□ -1.75
NPHP3Q7Z494 AF117829.1-206ENST00000621883 3802 ntBASIC4.11□□□□□ -1.75
NPHP3Q7Z494 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPHP3Q7Z494 AL049780.3-201ENST00000624612 1583 ntBASIC4.11□□□□□ -1.75
NPHP3Q7Z494 PWAR6-201ENST00000552334 4618 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.1□□□□□ -1.75
NPHP3Q7Z494 NSRP1P1-201ENST00000444067 1693 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPHP3Q7Z494 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NPHP3Q7Z494 RN7SKP44-201ENST00000363602 316 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 AP002088.1-201ENST00000382740 395 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 SNORA70E-201ENST00000384492 135 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 MCTS2P-201ENST00000394552 546 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 MIR1183-201ENST00000408856 89 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 RNA5SP508-201ENST00000411327 119 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.1□□□□□ -1.75
NPHP3Q7Z494 RPS6P12-201ENST00000432491 726 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 AC087499.2-201ENST00000432861 149 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 YWHAZP8-201ENST00000436935 731 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 MTND1P33-201ENST00000446251 917 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 AC006539.3-201ENST00000454258 129 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms