Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRT40Q6A162 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
KRT40Q6A162 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRT40Q6A162 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
KRT40Q6A162 RN7SKP202-201ENST00000410439 330 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 GSTM3P2-201ENST00000412746 530 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 RPS23P10-201ENST00000416185 486 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.96□□□□□ -1.62
KRT40Q6A162 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.96□□□□□ -1.62
KRT40Q6A162 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRT40Q6A162 NPM1P34-201ENST00000428821 893 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.96□□□□□ -1.62
KRT40Q6A162 MTND4LP10-201ENST00000435146 291 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.96□□□□□ -1.62
KRT40Q6A162 ACTR3P2-201ENST00000439585 1257 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 MTND6P13-201ENST00000443510 523 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.96□□□□□ -1.62
KRT40Q6A162 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.96□□□□□ -1.62
KRT40Q6A162 RPL38P1-201ENST00000460914 211 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 UQCRHP4-201ENST00000471686 272 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.96□□□□□ -1.62
KRT40Q6A162 AC108145.1-201ENST00000503770 153 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.96□□□□□ -1.62
KRT40Q6A162 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.96□□□□□ -1.62
KRT40Q6A162 ARL2BPP5-201ENST00000523141 481 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 AP003730.1-201ENST00000524605 285 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 TRAV8-5-201ENST00000537369 341 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 AC006064.5-201ENST00000541782 248 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.96□□□□□ -1.62
KRT40Q6A162 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.96□□□□□ -1.62
KRT40Q6A162 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.96□□□□□ -1.62
KRT40Q6A162 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.96□□□□□ -1.62
KRT40Q6A162 AC137800.2-201ENST00000574375 120 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.96□□□□□ -1.62
KRT40Q6A162 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.96□□□□□ -1.62
KRT40Q6A162 AL592295.2-201ENST00000612578 206 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 AC108479.2-201ENST00000617314 601 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 AL359880.1-201ENST00000621879 266 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 AC068880.5-201ENST00000624331 290 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 AC116563.2-201ENST00000624751 535 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 AC008013.2-202ENST00000637965 364 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRT40Q6A162 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRT40Q6A162 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
KRT40Q6A162 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRT40Q6A162 EIF2AP4-201ENST00000424793 1781 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
KRT40Q6A162 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
KRT40Q6A162 NEAT1-202ENST00000501122 22743 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AC010300.1-201ENST00000600671 5134 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 OR11H4-201ENST00000315409 1082 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 RNU1-108P-201ENST00000362556 161 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 SNORA72.1-201ENST00000363485 129 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 RNU6-114P-201ENST00000384704 105 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 MIR554-201ENST00000384874 96 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AL022722.2-201ENST00000402519 180 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.95□□□□□ -1.62
KRT40Q6A162 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRT40Q6A162 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.95□□□□□ -1.62
KRT40Q6A162 AL157831.1-201ENST00000426134 473 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRT40Q6A162 AC073464.1-201ENST00000429823 534 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 BTF3P10-201ENST00000433415 495 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AC023347.2-201ENST00000433994 462 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AC009961.2-201ENST00000435771 251 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 HLA-N-201ENST00000437516 135 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AL451074.3-201ENST00000437709 472 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 MTCO3P18-201ENST00000440206 761 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.95□□□□□ -1.62
KRT40Q6A162 MTND2P24-201ENST00000453434 806 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.95□□□□□ -1.62
KRT40Q6A162 RNU7-136P-201ENST00000458819 69 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AC092757.1-201ENST00000467293 467 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.95□□□□□ -1.62
KRT40Q6A162 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.95□□□□□ -1.62
KRT40Q6A162 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.95□□□□□ -1.62
KRT40Q6A162 RNU6-507P-201ENST00000516045 100 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.95□□□□□ -1.62
KRT40Q6A162 AP001646.1-201ENST00000527936 915 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 OR5AP1P-201ENST00000529730 940 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AP003122.4-201ENST00000530980 758 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
KRT40Q6A162 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.95□□□□□ -1.62
KRT40Q6A162 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.95□□□□□ -1.62
KRT40Q6A162 SULT1C2P1-202ENST00000562418 459 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AC122134.1-201ENST00000565664 1104 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.95□□□□□ -1.62
KRT40Q6A162 AP001180.3-201ENST00000582221 145 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.95□□□□□ -1.62
KRT40Q6A162 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.95□□□□□ -1.62
KRT40Q6A162 AL139286.1-201ENST00000604465 483 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AL008729.2-201ENST00000606393 473 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.95□□□□□ -1.62
KRT40Q6A162 AC103710.1-201ENST00000610003 901 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.95□□□□□ -1.62
KRT40Q6A162 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AL139089.1-201ENST00000620372 975 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AL445363.3-201ENST00000623080 671 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 AC140479.6-201ENST00000633535 357 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms