Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 HMGB1P15-201ENST00000453854 435 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 AC005410.1-202ENST00000460347 485 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 AL136126.1-201ENST00000473603 402 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC96Q2M329 AC004263.1-201ENST00000479327 332 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 TRBV12-2-201ENST00000489763 344 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 AC084024.2-201ENST00000503480 791 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 RN7SKP18-201ENST00000516005 275 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 RN7SKP289-201ENST00000517244 295 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 AC023632.1-201ENST00000518463 375 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC96Q2M329 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC96Q2M329 AC008011.1-201ENST00000545989 227 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC96Q2M329 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC96Q2M329 MRPS36P5-201ENST00000551909 298 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 AC044913.1-201ENST00000557200 430 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC96Q2M329 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC96Q2M329 AC053481.3-201ENST00000577881 843 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC96Q2M329 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC96Q2M329 AC231759.1-201ENST00000616455 597 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 MIR6075-201ENST00000620782 95 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 AC026634.1-201ENST00000634369 198 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC96Q2M329 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC96Q2M329 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC96Q2M329 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
CCDC96Q2M329 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC96Q2M329 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.32□□□□□ -1.72
CCDC96Q2M329 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC96Q2M329 RNU6-989P-201ENST00000362756 107 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AL024474.1-201ENST00000404655 591 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC96Q2M329 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC96Q2M329 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC96Q2M329 HIGD1AP12-201ENST00000427832 281 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 ATP5HP2-201ENST00000433885 485 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AC092393.1-201ENST00000439625 742 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC96Q2M329 MTATP6P26-201ENST00000445926 662 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 MTCYBP11-201ENST00000447254 1109 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AL358232.1-201ENST00000448030 501 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 RPS3AP46-201ENST00000448352 682 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AC069528.1-202ENST00000482888 637 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 KLRA1P-201ENST00000503499 986 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AC004062.1-201ENST00000509926 645 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC96Q2M329 RNU6-1231P-201ENST00000517185 103 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC96Q2M329 AP001317.1-201ENST00000531194 960 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AC090695.1-201ENST00000561269 1222 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 SULT1C2P1-202ENST00000562418 459 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC96Q2M329 AC061975.8-201ENST00000587058 721 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AC008751.2-201ENST00000597885 980 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AC091057.2-201ENST00000602594 792 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AL163642.2-201ENST00000604722 1019 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AL583856.2-201ENST00000606298 543 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 RNU1-30P-201ENST00000606575 163 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AC092954.1-201ENST00000609121 445 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AC006329.2-201ENST00000611491 394 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC96Q2M329 AL158163.2-201ENST00000619110 700 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AC013470.4-201ENST00000619978 986 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 AC009318.4-201ENST00000620496 486 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC96Q2M329 AC009093.8-201ENST00000641769 292 ntBASIC4.32□□□□□ -1.72
CCDC96Q2M329 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CCDC96Q2M329 RPS4XP5-202ENST00000449995 1334 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CCDC96Q2M329 SNORD82-201ENST00000365530 70 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 AL049545.1-201ENST00000401856 572 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 HLFP1-201ENST00000402375 499 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 SYF2P2-201ENST00000417620 583 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 AL451062.2-201ENST00000427515 271 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC96Q2M329 MTCO1P48-201ENST00000448024 1096 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC96Q2M329 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC96Q2M329 snoU13.4-201ENST00000458916 104 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 RPS27AP1-201ENST00000475545 471 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 AC093767.1-201ENST00000504523 156 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 MTCYBP37-201ENST00000510642 1133 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC96Q2M329 RNA5SP468-201ENST00000516782 93 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 NARSP2-201ENST00000518524 679 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC96Q2M329 DUXAP6-201ENST00000553858 601 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC96Q2M329 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC96Q2M329 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC96Q2M329 AC008739.3-201ENST00000603262 127 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 AC007349.4-201ENST00000608114 532 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 AP005137.2-201ENST00000609238 400 ntBASIC4.31□□□□□ -1.72
CCDC96Q2M329 AC022079.1-201ENST00000621546 602 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms