Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
LSM3P62310 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
LSM3P62310 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
LSM3P62310 MIR422A-201ENST00000362286 90 ntBASIC2.14□□□□□ -2.07
LSM3P62310 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.14□□□□□ -2.07
LSM3P62310 OR5H15-201ENST00000383696 930 ntBASIC2.14□□□□□ -2.07
LSM3P62310 RNU6-31P-201ENST00000384388 108 ntBASIC2.14□□□□□ -2.07
LSM3P62310 MIR183-201ENST00000384958 110 ntBASIC2.14□□□□□ -2.07
LSM3P62310 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.14□□□□□ -2.07
LSM3P62310 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.14□□□□□ -2.07
LSM3P62310 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.14□□□□□ -2.07
LSM3P62310 ELOCP13-201ENST00000443934 329 ntBASIC2.14□□□□□ -2.07
LSM3P62310 Z96811.1-201ENST00000445880 108 ntBASIC2.14□□□□□ -2.07
LSM3P62310 VN1R34P-201ENST00000447387 883 ntBASIC2.14□□□□□ -2.07
LSM3P62310 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.14□□□□□ -2.07
LSM3P62310 TRBV26-201ENST00000456572 344 ntBASIC2.14□□□□□ -2.07
LSM3P62310 snoU13.24-201ENST00000458998 104 ntBASIC2.14□□□□□ -2.07
LSM3P62310 AL136126.1-201ENST00000473603 402 ntBASIC2.14□□□□□ -2.07
LSM3P62310 AC015908.1-201ENST00000478739 476 ntBASIC2.14□□□□□ -2.07
LSM3P62310 GZMAP1-201ENST00000503054 631 ntBASIC2.14□□□□□ -2.07
LSM3P62310 RPL37P25-201ENST00000507308 276 ntBASIC2.14□□□□□ -2.07
LSM3P62310 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.14□□□□□ -2.07
LSM3P62310 SNORA31.20-201ENST00000517111 133 ntBASIC2.14□□□□□ -2.07
LSM3P62310 AC022690.1-201ENST00000526681 550 ntBASIC2.14□□□□□ -2.07
LSM3P62310 ACTR3BP3-201ENST00000565577 979 ntBASIC2.14□□□□□ -2.07
LSM3P62310 MYL12BP1-201ENST00000569826 507 ntBASIC2.14□□□□□ -2.07
LSM3P62310 AC012493.2-201ENST00000595083 291 ntBASIC2.14□□□□□ -2.07
LSM3P62310 ELOCP35-201ENST00000604289 336 ntBASIC2.14□□□□□ -2.07
LSM3P62310 BNIP3P7-201ENST00000605641 516 ntBASIC2.14□□□□□ -2.07
LSM3P62310 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.14□□□□□ -2.07
LSM3P62310 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.14□□□□□ -2.07
LSM3P62310 AC020923.1-201ENST00000624021 917 ntBASIC2.14□□□□□ -2.07
LSM3P62310 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
LSM3P62310 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.14□□□□□ -2.07
LSM3P62310 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
LSM3P62310 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.13□□□□□ -2.07
LSM3P62310 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
LSM3P62310 RNU6-50P-201ENST00000362356 103 ntBASIC2.13□□□□□ -2.07
LSM3P62310 RNU6-263P-201ENST00000363811 107 ntBASIC2.13□□□□□ -2.07
LSM3P62310 SNORA51.11-201ENST00000384442 131 ntBASIC2.13□□□□□ -2.07
LSM3P62310 ARF4P3-201ENST00000397387 509 ntBASIC2.13□□□□□ -2.07
LSM3P62310 MIR937-201ENST00000401271 86 ntBASIC2.13□□□□□ -2.07
LSM3P62310 MTCO3P4-201ENST00000419236 787 ntBASIC2.13□□□□□ -2.07
LSM3P62310 MTCO1P45-201ENST00000431457 267 ntBASIC2.13□□□□□ -2.07
LSM3P62310 AL139132.1-201ENST00000431587 344 ntBASIC2.13□□□□□ -2.07
LSM3P62310 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.13□□□□□ -2.07
LSM3P62310 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.13□□□□□ -2.07
LSM3P62310 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LSM3P62310 RPL6P5-201ENST00000445678 828 ntBASIC2.13□□□□□ -2.07
LSM3P62310 RPS29P12-201ENST00000460178 152 ntBASIC2.13□□□□□ -2.07
LSM3P62310 AC103987.1-201ENST00000473394 348 ntBASIC2.13□□□□□ -2.07
LSM3P62310 SYPL1P1-201ENST00000473622 768 ntBASIC2.13□□□□□ -2.07
LSM3P62310 AC104435.1-201ENST00000483483 166 ntBASIC2.13□□□□□ -2.07
LSM3P62310 AL133372.1-201ENST00000493565 745 ntBASIC2.13□□□□□ -2.07
LSM3P62310 SEM1P1-201ENST00000506694 209 ntBASIC2.13□□□□□ -2.07
LSM3P62310 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LSM3P62310 HIGD1AP13-201ENST00000509878 289 ntBASIC2.13□□□□□ -2.07
LSM3P62310 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.13□□□□□ -2.07
LSM3P62310 IGLV3-17-201ENST00000519099 244 ntBASIC2.13□□□□□ -2.07
LSM3P62310 AC010306.1-201ENST00000523223 1117 ntBASIC2.13□□□□□ -2.07
LSM3P62310 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.13□□□□□ -2.07
LSM3P62310 OSBPL9P3-201ENST00000534523 595 ntBASIC2.13□□□□□ -2.07
LSM3P62310 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.13□□□□□ -2.07
LSM3P62310 AL121603.1-201ENST00000553815 142 ntBASIC2.13□□□□□ -2.07
LSM3P62310 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LSM3P62310 AC092474.3-201ENST00000603022 568 ntBASIC2.13□□□□□ -2.07
LSM3P62310 AC034102.8-201ENST00000615146 484 ntBASIC2.13□□□□□ -2.07
LSM3P62310 MIR7975-201ENST00000619350 68 ntBASIC2.13□□□□□ -2.07
LSM3P62310 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LSM3P62310 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
LSM3P62310 AL049737.1-201ENST00000413920 1403 ntBASIC2.13□□□□□ -2.07
LSM3P62310 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
LSM3P62310 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
LSM3P62310 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.12□□□□□ -2.07
LSM3P62310 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LSM3P62310 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LSM3P62310 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LSM3P62310 RNA5SP374-201ENST00000362939 125 ntBASIC2.12□□□□□ -2.07
LSM3P62310 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
LSM3P62310 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LSM3P62310 FO393413.1-201ENST00000402892 195 ntBASIC2.12□□□□□ -2.07
LSM3P62310 MTATP6P31-201ENST00000406985 692 ntBASIC2.12□□□□□ -2.07
LSM3P62310 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LSM3P62310 RNA5SP38-201ENST00000410750 119 ntBASIC2.12□□□□□ -2.07
LSM3P62310 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.12□□□□□ -2.07
LSM3P62310 RPS6P14-201ENST00000425165 719 ntBASIC2.12□□□□□ -2.07
LSM3P62310 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LSM3P62310 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.12□□□□□ -2.07
LSM3P62310 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC2.12□□□□□ -2.07
LSM3P62310 MTCYBP12-201ENST00000440559 1134 ntBASIC2.12□□□□□ -2.07
LSM3P62310 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.12□□□□□ -2.07
LSM3P62310 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.12□□□□□ -2.07
LSM3P62310 RPS23P3-201ENST00000470993 430 ntBASIC2.12□□□□□ -2.07
LSM3P62310 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LSM3P62310 AC135721.1-201ENST00000497954 479 ntBASIC2.12□□□□□ -2.07
LSM3P62310 RNA5SP468-201ENST00000516782 93 ntBASIC2.12□□□□□ -2.07
LSM3P62310 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.12□□□□□ -2.07
LSM3P62310 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.12□□□□□ -2.07
LSM3P62310 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.12□□□□□ -2.07
LSM3P62310 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms