Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
AP1S1P61966 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
AP1S1P61966 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.71□□□□□ -1.98
AP1S1P61966 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
AP1S1P61966 AC233263.6-201ENST00000631132 1963 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
AP1S1P61966 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
AP1S1P61966 RNA5SP391-201ENST00000363456 119 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 SNORA5B-201ENST00000363786 132 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 SNORD56.5-201ENST00000364281 72 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 MIR181B1-201ENST00000385240 110 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 RNU6-1077P-201ENST00000410506 102 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.71□□□□□ -1.98
AP1S1P61966 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.71□□□□□ -1.98
AP1S1P61966 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.71□□□□□ -1.98
AP1S1P61966 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.71□□□□□ -1.98
AP1S1P61966 AC019097.1-201ENST00000424783 735 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 Z85994.2-201ENST00000434327 452 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 UBBP3-201ENST00000445497 241 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 Z96811.1-201ENST00000445880 108 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 TPMTP4-201ENST00000450749 678 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 SNORD109B-201ENST00000458961 67 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 SNORD109A-201ENST00000459128 67 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 AP001486.1-201ENST00000463339 476 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.71□□□□□ -1.98
AP1S1P61966 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
AP1S1P61966 AC006445.2-201ENST00000510061 472 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.71□□□□□ -1.98
AP1S1P61966 AL133271.1-201ENST00000538229 291 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.71□□□□□ -1.98
AP1S1P61966 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.71□□□□□ -1.98
AP1S1P61966 AL355836.1-201ENST00000555951 870 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
AP1S1P61966 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.71□□□□□ -1.98
AP1S1P61966 VN1R90P-201ENST00000595717 726 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
AP1S1P61966 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.71□□□□□ -1.98
AP1S1P61966 MIR6733-201ENST00000635723 61 ntBASIC2.71□□□□□ -1.98
AP1S1P61966 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
AP1S1P61966 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
AP1S1P61966 AL365361.1-201ENST00000566942 3481 ntBASIC2.7□□□□□ -1.98
AP1S1P61966 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
AP1S1P61966 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
AP1S1P61966 CD24P4-201ENST00000382840 243 ntBASIC2.7□□□□□ -1.98
AP1S1P61966 RNU6-891P-201ENST00000384280 111 ntBASIC2.7□□□□□ -1.98
AP1S1P61966 RNU6-185P-201ENST00000384421 107 ntBASIC2.7□□□□□ -1.98
AP1S1P61966 AL139095.1-201ENST00000404326 391 ntBASIC2.7□□□□□ -1.98
AP1S1P61966 AL590004.2-201ENST00000404787 371 ntBASIC2.7□□□□□ -1.98
AP1S1P61966 RNA5SP184-201ENST00000411071 108 ntBASIC2.7□□□□□ -1.98
AP1S1P61966 RNU2-6P-201ENST00000411404 190 ntBASIC2.7□□□□□ -1.98
AP1S1P61966 MTCYBP12-201ENST00000440559 1134 ntBASIC2.7□□□□□ -1.98
AP1S1P61966 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.7□□□□□ -1.98
AP1S1P61966 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.7□□□□□ -1.98
AP1S1P61966 AC004924.1-201ENST00000480160 781 ntBASIC2.7□□□□□ -1.98
AP1S1P61966 AL049873.1-201ENST00000480540 376 ntBASIC2.7□□□□□ -1.98
AP1S1P61966 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.7□□□□□ -1.98
AP1S1P61966 RNU6-1073P-201ENST00000517182 106 ntBASIC2.7□□□□□ -1.98
AP1S1P61966 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.7□□□□□ -1.98
AP1S1P61966 AP001207.1-201ENST00000524051 481 ntBASIC2.7□□□□□ -1.98
AP1S1P61966 AC023158.1-201ENST00000561632 1025 ntBASIC2.7□□□□□ -1.98
AP1S1P61966 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.7□□□□□ -1.98
AP1S1P61966 MIR4319-201ENST00000577285 85 ntBASIC2.7□□□□□ -1.98
AP1S1P61966 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.7□□□□□ -1.98
AP1S1P61966 MIR4635-201ENST00000583759 79 ntBASIC2.7□□□□□ -1.98
AP1S1P61966 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.7□□□□□ -1.98
AP1S1P61966 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.7□□□□□ -1.98
AP1S1P61966 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
AP1S1P61966 AC062016.1-201ENST00000355719 319 ntBASIC2.69□□□□□ -1.98
AP1S1P61966 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.69□□□□□ -1.98
AP1S1P61966 MIR421-201ENST00000365696 85 ntBASIC2.69□□□□□ -1.98
AP1S1P61966 DEFB109C-201ENST00000382575 264 ntBASIC2.69□□□□□ -1.98
AP1S1P61966 DEFB109B-201ENST00000382656 264 ntBASIC2.69□□□□□ -1.98
AP1S1P61966 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
AP1S1P61966 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S1P61966 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.69□□□□□ -1.98
AP1S1P61966 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.69□□□□□ -1.98
AP1S1P61966 MED6P1-201ENST00000439659 713 ntBASIC2.69□□□□□ -1.98
AP1S1P61966 AL627224.1-201ENST00000448334 444 ntBASIC2.69□□□□□ -1.98
AP1S1P61966 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S1P61966 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S1P61966 HMGB1P38-201ENST00000490557 577 ntBASIC2.69□□□□□ -1.98
AP1S1P61966 AC096725.1-201ENST00000514266 313 ntBASIC2.69□□□□□ -1.98
AP1S1P61966 AC117525.1-201ENST00000515228 503 ntBASIC2.69□□□□□ -1.98
AP1S1P61966 RNU6-826P-201ENST00000516827 104 ntBASIC2.69□□□□□ -1.98
AP1S1P61966 OR4A45P-201ENST00000529954 901 ntBASIC2.69□□□□□ -1.98
AP1S1P61966 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.69□□□□□ -1.98
AP1S1P61966 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.69□□□□□ -1.98
AP1S1P61966 OR2AS2P-201ENST00000606902 342 ntBASIC2.69□□□□□ -1.98
AP1S1P61966 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.69□□□□□ -1.98
AP1S1P61966 MIR634-201ENST00000385208 97 ntBASIC2.68□□□□□ -1.98
AP1S1P61966 AL355379.1-201ENST00000405542 640 ntBASIC2.68□□□□□ -1.98
AP1S1P61966 AL096701.2-201ENST00000416920 238 ntBASIC2.68□□□□□ -1.98
AP1S1P61966 NUP35P1-201ENST00000422734 947 ntBASIC2.68□□□□□ -1.98
AP1S1P61966 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.68□□□□□ -1.98
AP1S1P61966 ARL5AP3-201ENST00000439327 386 ntBASIC2.68□□□□□ -1.98
AP1S1P61966 AP000936.2-201ENST00000447151 681 ntBASIC2.68□□□□□ -1.98
AP1S1P61966 HMGB1P26-201ENST00000452520 628 ntBASIC2.68□□□□□ -1.98
AP1S1P61966 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms