Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.7□□□□□ -1.82
MSH6P52701 AL162233.1-201ENST00000620014 944 ntBASIC3.7□□□□□ -1.82
MSH6P52701 AC092593.1-201ENST00000515413 1815 ntBASIC3.7□□□□□ -1.82
MSH6P52701 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.7□□□□□ -1.82
MSH6P52701 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
MSH6P52701 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
MSH6P52701 RNU6-883P-201ENST00000384597 107 ntBASIC3.69□□□□□ -1.82
MSH6P52701 RNU6-328P-201ENST00000390887 106 ntBASIC3.69□□□□□ -1.82
MSH6P52701 RNU4-74P-201ENST00000411280 161 ntBASIC3.69□□□□□ -1.82
MSH6P52701 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.69□□□□□ -1.82
MSH6P52701 MTND4P11-201ENST00000417020 1058 ntBASIC3.69□□□□□ -1.82
MSH6P52701 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.69□□□□□ -1.82
MSH6P52701 AC112220.1-201ENST00000434628 355 ntBASIC3.69□□□□□ -1.82
MSH6P52701 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.69□□□□□ -1.82
MSH6P52701 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.69□□□□□ -1.82
MSH6P52701 AC025181.1-201ENST00000477507 416 ntBASIC3.69□□□□□ -1.82
MSH6P52701 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.69□□□□□ -1.82
MSH6P52701 SRIP1-201ENST00000489235 288 ntBASIC3.69□□□□□ -1.82
MSH6P52701 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.69□□□□□ -1.82
MSH6P52701 RNA5SP458-201ENST00000516188 119 ntBASIC3.69□□□□□ -1.82
MSH6P52701 AC093331.1-201ENST00000521474 169 ntBASIC3.69□□□□□ -1.82
MSH6P52701 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.69□□□□□ -1.82
MSH6P52701 MIR548Y-201ENST00000582739 110 ntBASIC3.69□□□□□ -1.82
MSH6P52701 AC009318.3-201ENST00000616916 503 ntBASIC3.69□□□□□ -1.82
MSH6P52701 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.69□□□□□ -1.82
MSH6P52701 AC009501.3-201ENST00000605001 1352 ntBASIC3.69□□□□□ -1.82
MSH6P52701 AC096656.1-201ENST00000623826 1364 ntBASIC3.69□□□□□ -1.82
MSH6P52701 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.69□□□□□ -1.82
MSH6P52701 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
MSH6P52701 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MSH6P52701 MIR26A1-201ENST00000362205 77 ntBASIC3.68□□□□□ -1.82
MSH6P52701 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.68□□□□□ -1.82
MSH6P52701 MTND4LP14-201ENST00000429447 288 ntBASIC3.68□□□□□ -1.82
MSH6P52701 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.68□□□□□ -1.82
MSH6P52701 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.68□□□□□ -1.82
MSH6P52701 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.68□□□□□ -1.82
MSH6P52701 HIGD1AP2-201ENST00000446367 280 ntBASIC3.68□□□□□ -1.82
MSH6P52701 AL513343.1-201ENST00000451818 792 ntBASIC3.68□□□□□ -1.82
MSH6P52701 RPL21P99-201ENST00000480369 423 ntBASIC3.68□□□□□ -1.82
MSH6P52701 AC025459.1-201ENST00000504072 156 ntBASIC3.68□□□□□ -1.82
MSH6P52701 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.68□□□□□ -1.82
MSH6P52701 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.68□□□□□ -1.82
MSH6P52701 SMARCE1P4-201ENST00000523647 241 ntBASIC3.68□□□□□ -1.82
MSH6P52701 NOP56P3-201ENST00000549457 385 ntBASIC3.68□□□□□ -1.82
MSH6P52701 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.68□□□□□ -1.82
MSH6P52701 AL392112.1-201ENST00000605115 829 ntBASIC3.68□□□□□ -1.82
MSH6P52701 AC008277.2-201ENST00000605196 797 ntBASIC3.68□□□□□ -1.82
MSH6P52701 AC090525.3-201ENST00000605601 189 ntBASIC3.68□□□□□ -1.82
MSH6P52701 MIR7973-1-201ENST00000614683 76 ntBASIC3.68□□□□□ -1.82
MSH6P52701 AC123768.4-201ENST00000616244 701 ntBASIC3.68□□□□□ -1.82
MSH6P52701 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.68□□□□□ -1.82
MSH6P52701 PISRT1-201ENST00000626175 531 ntBASIC3.68□□□□□ -1.82
MSH6P52701 HSPA8P4-201ENST00000511877 1920 ntBASIC3.68□□□□□ -1.82
MSH6P52701 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.68□□□□□ -1.82
MSH6P52701 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.67□□□□□ -1.82
MSH6P52701 MIR518C-201ENST00000384822 101 ntBASIC3.67□□□□□ -1.82
MSH6P52701 MTND3P20-201ENST00000407663 186 ntBASIC3.67□□□□□ -1.82
MSH6P52701 AC010385.1-201ENST00000412374 256 ntBASIC3.67□□□□□ -1.82
MSH6P52701 AC004987.3-201ENST00000413879 771 ntBASIC3.67□□□□□ -1.82
MSH6P52701 AIMP1P1-201ENST00000418670 937 ntBASIC3.67□□□□□ -1.82
MSH6P52701 AC012498.1-201ENST00000424037 437 ntBASIC3.67□□□□□ -1.82
MSH6P52701 ARF4P2-201ENST00000430209 526 ntBASIC3.67□□□□□ -1.82
MSH6P52701 ZNF965P-201ENST00000432501 817 ntBASIC3.67□□□□□ -1.82
MSH6P52701 FCF1P1-201ENST00000432690 571 ntBASIC3.67□□□□□ -1.82
MSH6P52701 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.67□□□□□ -1.82
MSH6P52701 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.67□□□□□ -1.82
MSH6P52701 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.67□□□□□ -1.82
MSH6P52701 TPRKBP1-201ENST00000456243 481 ntBASIC3.67□□□□□ -1.82
MSH6P52701 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.67□□□□□ -1.82
MSH6P52701 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.67□□□□□ -1.82
MSH6P52701 YWHAZP1-201ENST00000556286 722 ntBASIC3.67□□□□□ -1.82
MSH6P52701 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.67□□□□□ -1.82
MSH6P52701 NTAN1P1-201ENST00000603150 646 ntBASIC3.67□□□□□ -1.82
MSH6P52701 AC083899.3-201ENST00000603413 594 ntBASIC3.67□□□□□ -1.82
MSH6P52701 SUMO2P14-201ENST00000604488 293 ntBASIC3.67□□□□□ -1.82
MSH6P52701 AC104307.1-201ENST00000616142 196 ntBASIC3.67□□□□□ -1.82
MSH6P52701 AL355493.4-201ENST00000618530 292 ntBASIC3.67□□□□□ -1.82
MSH6P52701 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
MSH6P52701 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
MSH6P52701 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
MSH6P52701 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.67□□□□□ -1.82
MSH6P52701 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.67□□□□□ -1.82
MSH6P52701 AL139811.1-201ENST00000424779 2299 ntBASIC3.66□□□□□ -1.82
MSH6P52701 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.66□□□□□ -1.82
MSH6P52701 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
MSH6P52701 SNORD51.1-201ENST00000365405 77 ntBASIC3.66□□□□□ -1.82
MSH6P52701 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
MSH6P52701 RNU6-452P-201ENST00000384406 107 ntBASIC3.66□□□□□ -1.82
MSH6P52701 AC107081.1-201ENST00000414975 361 ntBASIC3.66□□□□□ -1.82
MSH6P52701 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.66□□□□□ -1.82
MSH6P52701 AC003982.1-202ENST00000469928 248 ntBASIC3.66□□□□□ -1.82
MSH6P52701 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.66□□□□□ -1.82
MSH6P52701 AP004217.1-201ENST00000480579 346 ntBASIC3.66□□□□□ -1.82
MSH6P52701 OR9N1P-202ENST00000494289 481 ntBASIC3.66□□□□□ -1.82
MSH6P52701 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.66□□□□□ -1.82
MSH6P52701 POU5F1P7-201ENST00000508759 541 ntBASIC3.66□□□□□ -1.82
MSH6P52701 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.66□□□□□ -1.82
MSH6P52701 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.66□□□□□ -1.82
MSH6P52701 VN1R84P-201ENST00000593697 235 ntBASIC3.66□□□□□ -1.82
MSH6P52701 AC012467.1-201ENST00000607740 256 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms