Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 HSPE1P5-201ENST00000561489 272 ntBASIC4.98□□□□□ -1.61
VAMP1P23763 ZNF192P1-203ENST00000565888 810 ntBASIC4.98□□□□□ -1.61
VAMP1P23763 AC126323.4-201ENST00000566935 234 ntBASIC4.98□□□□□ -1.61
VAMP1P23763 AL163952.1-202ENST00000569625 600 ntBASIC4.98□□□□□ -1.61
VAMP1P23763 MIR4685-201ENST00000578185 69 ntBASIC4.98□□□□□ -1.61
VAMP1P23763 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.98□□□□□ -1.61
VAMP1P23763 BNIP3P25-201ENST00000596023 559 ntBASIC4.98□□□□□ -1.61
VAMP1P23763 AC012119.1-201ENST00000603184 222 ntBASIC4.98□□□□□ -1.61
VAMP1P23763 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.98□□□□□ -1.61
VAMP1P23763 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.98□□□□□ -1.61
VAMP1P23763 AC090132.2-201ENST00000615881 347 ntBASIC4.98□□□□□ -1.61
VAMP1P23763 AC073488.6-201ENST00000632293 754 ntBASIC4.98□□□□□ -1.61
VAMP1P23763 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VAMP1P23763 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.98□□□□□ -1.61
VAMP1P23763 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VAMP1P23763 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.98□□□□□ -1.61
VAMP1P23763 AP001029.2-203ENST00000589795 4910 ntBASIC4.98□□□□□ -1.61
VAMP1P23763 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
VAMP1P23763 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.98□□□□□ -1.61
VAMP1P23763 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VAMP1P23763 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VAMP1P23763 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VAMP1P23763 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
VAMP1P23763 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP1P23763 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP1P23763 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
VAMP1P23763 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP1P23763 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP1P23763 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.97□□□□□ -1.61
VAMP1P23763 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.97□□□□□ -1.61
VAMP1P23763 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP1P23763 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP1P23763 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP1P23763 RNU6-694P-201ENST00000364071 147 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 RN7SKP191-201ENST00000364713 306 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 RN7SKP69-201ENST00000365390 305 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 SNORA4.3-201ENST00000365564 137 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 RNU6-395P-201ENST00000365662 106 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP1P23763 SNORA70.6-201ENST00000383934 134 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 RNU6-1179P-201ENST00000384667 107 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP1P23763 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP1P23763 RPLP0P7-201ENST00000416050 667 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 TOMM20P4-201ENST00000427861 435 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.97□□□□□ -1.61
VAMP1P23763 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.97□□□□□ -1.61
VAMP1P23763 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.97□□□□□ -1.61
VAMP1P23763 HSFY6P-201ENST00000445573 403 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.97□□□□□ -1.61
VAMP1P23763 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.97□□□□□ -1.61
VAMP1P23763 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.97□□□□□ -1.61
VAMP1P23763 RPL21P93-201ENST00000480465 489 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 HMGB1P30-201ENST00000492455 606 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 AC018645.1-201ENST00000505003 109 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 RNA5SP418-201ENST00000515951 117 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 HMGB1P19-201ENST00000517578 577 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 AC090136.1-201ENST00000520009 240 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC4.97□□□□□ -1.61
VAMP1P23763 AC135001.1-201ENST00000544546 283 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.97□□□□□ -1.61
VAMP1P23763 AC087477.6-201ENST00000559595 843 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.97□□□□□ -1.61
VAMP1P23763 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC4.97□□□□□ -1.61
VAMP1P23763 AC010287.1-201ENST00000566916 357 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.97□□□□□ -1.61
VAMP1P23763 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.97□□□□□ -1.61
VAMP1P23763 MIR4795-201ENST00000584182 89 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.97□□□□□ -1.61
VAMP1P23763 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC4.97□□□□□ -1.61
VAMP1P23763 RPS4XP21-201ENST00000603814 750 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 AL121757.2-201ENST00000611223 313 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 uc_338.15-201ENST00000615470 191 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.97□□□□□ -1.61
VAMP1P23763 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP1P23763 AC022400.9-201ENST00000623633 273 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC4.97□□□□□ -1.61
VAMP1P23763 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VAMP1P23763 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP1P23763 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
VAMP1P23763 AC007785.2-201ENST00000598627 1916 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP1P23763 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP1P23763 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.97□□□□□ -1.61
VAMP1P23763 MUC2-202ENST00000613187 4845 ntBASIC4.97□□□□□ -1.61
VAMP1P23763 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
VAMP1P23763 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VAMP1P23763 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VAMP1P23763 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
VAMP1P23763 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VAMP1P23763 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
VAMP1P23763 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VAMP1P23763 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VAMP1P23763 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VAMP1P23763 Y_RNA.33-201ENST00000362591 102 ntBASIC4.96□□□□□ -1.62
VAMP1P23763 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.96□□□□□ -1.62
VAMP1P23763 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VAMP1P23763 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VAMP1P23763 Y_RNA.480-201ENST00000384364 102 ntBASIC4.96□□□□□ -1.62
VAMP1P23763 Y_RNA.534-201ENST00000384599 112 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms