Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.54□□□□□ -2
COL5A1P20908 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
COL5A1P20908 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
COL5A1P20908 RNU6-697P-201ENST00000363348 107 ntBASIC2.54□□□□□ -2
COL5A1P20908 Y_RNA.164-201ENST00000363709 102 ntBASIC2.54□□□□□ -2
COL5A1P20908 RNU2-6P-201ENST00000411404 190 ntBASIC2.54□□□□□ -2
COL5A1P20908 AL135786.1-201ENST00000415892 214 ntBASIC2.54□□□□□ -2
COL5A1P20908 MTND4P11-201ENST00000417020 1058 ntBASIC2.54□□□□□ -2
COL5A1P20908 MTND4P24-201ENST00000424002 397 ntBASIC2.54□□□□□ -2
COL5A1P20908 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL5A1P20908 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.54□□□□□ -2
COL5A1P20908 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.54□□□□□ -2
COL5A1P20908 AP000867.2-201ENST00000532468 320 ntBASIC2.54□□□□□ -2
COL5A1P20908 MTND2P17-201ENST00000550281 688 ntBASIC2.54□□□□□ -2
COL5A1P20908 AC074029.2-201ENST00000551045 634 ntBASIC2.54□□□□□ -2
COL5A1P20908 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.54□□□□□ -2
COL5A1P20908 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.54□□□□□ -2
COL5A1P20908 AC090330.1-201ENST00000588646 764 ntBASIC2.54□□□□□ -2
COL5A1P20908 AC011458.1-201ENST00000604034 617 ntBASIC2.54□□□□□ -2
COL5A1P20908 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.54□□□□□ -2
COL5A1P20908 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.54□□□□□ -2
COL5A1P20908 AC079228.1-201ENST00000624774 1049 ntBASIC2.54□□□□□ -2
COL5A1P20908 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.54□□□□□ -2
COL5A1P20908 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.53□□□□□ -2
COL5A1P20908 AP000526.1-201ENST00000603308 1388 ntBASIC2.53□□□□□ -2
COL5A1P20908 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.53□□□□□ -2
COL5A1P20908 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COL5A1P20908 CYCSP45-201ENST00000402289 315 ntBASIC2.53□□□□□ -2
COL5A1P20908 RPLP0P7-201ENST00000416050 667 ntBASIC2.53□□□□□ -2
COL5A1P20908 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.53□□□□□ -2
COL5A1P20908 RPL7P10-201ENST00000417407 739 ntBASIC2.53□□□□□ -2
COL5A1P20908 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.53□□□□□ -2
COL5A1P20908 AL590103.1-201ENST00000434488 307 ntBASIC2.53□□□□□ -2
COL5A1P20908 RPL23AP74-201ENST00000437246 471 ntBASIC2.53□□□□□ -2
COL5A1P20908 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.53□□□□□ -2
COL5A1P20908 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.53□□□□□ -2
COL5A1P20908 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.53□□□□□ -2
COL5A1P20908 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.53□□□□□ -2
COL5A1P20908 OR6K1P-201ENST00000456766 971 ntBASIC2.53□□□□□ -2
COL5A1P20908 HMGB1P25-201ENST00000468402 607 ntBASIC2.53□□□□□ -2
COL5A1P20908 MTND3P24-201ENST00000506306 329 ntBASIC2.53□□□□□ -2
COL5A1P20908 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.53□□□□□ -2
COL5A1P20908 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.53□□□□□ -2
COL5A1P20908 VN1R81P-201ENST00000602085 372 ntBASIC2.53□□□□□ -2
COL5A1P20908 AC016727.1-205ENST00000605437 569 ntBASIC2.53□□□□□ -2
COL5A1P20908 AC034229.4-201ENST00000607861 441 ntBASIC2.53□□□□□ -2
COL5A1P20908 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
COL5A1P20908 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COL5A1P20908 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2.01
COL5A1P20908 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
COL5A1P20908 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
COL5A1P20908 SNORD114-30-201ENST00000364448 72 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL5A1P20908 RNU6-40P-201ENST00000384254 107 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 SNORA36C-201ENST00000384289 132 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 AL355143.1-201ENST00000407101 841 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 PTGES3P2-201ENST00000407942 482 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 RNU4-26P-201ENST00000410270 107 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 Z98742.3-201ENST00000418637 326 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.52□□□□□ -2.01
COL5A1P20908 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.52□□□□□ -2.01
COL5A1P20908 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.52□□□□□ -2.01
COL5A1P20908 AL353718.1-201ENST00000451028 517 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.52□□□□□ -2.01
COL5A1P20908 RPL9P32-201ENST00000464118 620 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.52□□□□□ -2.01
COL5A1P20908 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.52□□□□□ -2.01
COL5A1P20908 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.52□□□□□ -2.01
COL5A1P20908 AC104997.1-201ENST00000519761 717 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 MIR4635-201ENST00000583759 79 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 AP003117.1-201ENST00000602771 554 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 AC005776.1-201ENST00000603164 290 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 AL139022.2-201ENST00000606934 443 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 AC135803.1-201ENST00000608748 565 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 AC104307.1-201ENST00000616142 196 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 AL133370.2-201ENST00000619934 439 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 AC000123.2-201ENST00000623124 461 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 AL136520.1-201ENST00000600311 1322 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.52□□□□□ -2.01
COL5A1P20908 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.52□□□□□ -2.01
COL5A1P20908 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL5A1P20908 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.52□□□□□ -2.01
COL5A1P20908 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.52□□□□□ -2.01
COL5A1P20908 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 MTND4LP21-201ENST00000415303 295 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.52□□□□□ -2.01
COL5A1P20908 AL137014.1-201ENST00000420490 1226 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.52□□□□□ -2.01
COL5A1P20908 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.52□□□□□ -2.01
COL5A1P20908 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.52□□□□□ -2.01
COL5A1P20908 RNF2P1-201ENST00000442955 1010 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.52□□□□□ -2.01
COL5A1P20908 RPL23AP11-201ENST00000475260 469 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.52□□□□□ -2.01
COL5A1P20908 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.52□□□□□ -2.01
COL5A1P20908 AC008565.1-201ENST00000509046 885 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.52□□□□□ -2.01
COL5A1P20908 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
COL5A1P20908 MTND5P21-201ENST00000531961 522 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms