Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RPL30P2-201ENST00000414021 291 ntBASIC4.15□□□□□ -1.75
RTN3O95197 AC092447.6-201ENST00000414578 210 ntBASIC4.15□□□□□ -1.75
RTN3O95197 AC127526.1-201ENST00000417526 366 ntBASIC4.15□□□□□ -1.75
RTN3O95197 Z97055.1-201ENST00000419730 712 ntBASIC4.15□□□□□ -1.75
RTN3O95197 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.15□□□□□ -1.75
RTN3O95197 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RTN3O95197 MTND4LP10-201ENST00000435146 291 ntBASIC4.15□□□□□ -1.75
RTN3O95197 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.15□□□□□ -1.75
RTN3O95197 YWHAZP7-201ENST00000436906 631 ntBASIC4.15□□□□□ -1.75
RTN3O95197 SNRPEP7-201ENST00000438350 220 ntBASIC4.15□□□□□ -1.75
RTN3O95197 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.15□□□□□ -1.75
RTN3O95197 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.15□□□□□ -1.75
RTN3O95197 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.15□□□□□ -1.75
RTN3O95197 AL139099.1-201ENST00000497398 403 ntBASIC4.15□□□□□ -1.75
RTN3O95197 COX7A2P2-201ENST00000505291 250 ntBASIC4.15□□□□□ -1.75
RTN3O95197 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.15□□□□□ -1.75
RTN3O95197 AC118282.1-201ENST00000506408 765 ntBASIC4.15□□□□□ -1.75
RTN3O95197 NDUFA5P2-201ENST00000519723 344 ntBASIC4.15□□□□□ -1.75
RTN3O95197 AC239860.2-201ENST00000525886 270 ntBASIC4.15□□□□□ -1.75
RTN3O95197 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.15□□□□□ -1.75
RTN3O95197 CYCSP30-201ENST00000546447 172 ntBASIC4.15□□□□□ -1.75
RTN3O95197 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.15□□□□□ -1.75
RTN3O95197 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.15□□□□□ -1.75
RTN3O95197 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.15□□□□□ -1.75
RTN3O95197 HSPE1P5-201ENST00000561489 272 ntBASIC4.15□□□□□ -1.75
RTN3O95197 AC009094.1-201ENST00000564443 426 ntBASIC4.15□□□□□ -1.75
RTN3O95197 MIR5685-201ENST00000579080 79 ntBASIC4.15□□□□□ -1.75
RTN3O95197 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.15□□□□□ -1.75
RTN3O95197 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.15□□□□□ -1.75
RTN3O95197 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.15□□□□□ -1.75
RTN3O95197 XIAPP1-201ENST00000603162 600 ntBASIC4.15□□□□□ -1.75
RTN3O95197 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.15□□□□□ -1.75
RTN3O95197 AL139418.1-201ENST00000613613 177 ntBASIC4.15□□□□□ -1.75
RTN3O95197 AC092628.2-201ENST00000622492 339 ntBASIC4.15□□□□□ -1.75
RTN3O95197 AP002791.1-201ENST00000623291 381 ntBASIC4.15□□□□□ -1.75
RTN3O95197 AC112200.1-201ENST00000625015 234 ntBASIC4.15□□□□□ -1.75
RTN3O95197 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RTN3O95197 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RTN3O95197 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
RTN3O95197 AP001350.1-201ENST00000601906 1524 ntBASIC4.15□□□□□ -1.75
RTN3O95197 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RTN3O95197 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.14□□□□□ -1.75
RTN3O95197 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.14□□□□□ -1.75
RTN3O95197 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RTN3O95197 USP8P1-201ENST00000494673 3183 ntBASIC4.14□□□□□ -1.75
RTN3O95197 OR5H2-201ENST00000355273 945 ntBASIC4.14□□□□□ -1.75
RTN3O95197 RNU6-952P-201ENST00000391164 108 ntBASIC4.14□□□□□ -1.75
RTN3O95197 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RTN3O95197 RN7SKP159-201ENST00000410657 292 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.14□□□□□ -1.75
RTN3O95197 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.14□□□□□ -1.75
RTN3O95197 TXNL1P1-201ENST00000429528 554 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.14□□□□□ -1.75
RTN3O95197 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.14□□□□□ -1.75
RTN3O95197 MUPP-201ENST00000438111 566 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AL008629.1-201ENST00000438615 184 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AC083863.1-201ENST00000438811 231 ntBASIC4.14□□□□□ -1.75
RTN3O95197 SDCBPP1-201ENST00000440192 890 ntBASIC4.14□□□□□ -1.75
RTN3O95197 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RTN3O95197 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.14□□□□□ -1.75
RTN3O95197 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.14□□□□□ -1.75
RTN3O95197 HMGB3P8-201ENST00000449709 577 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.14□□□□□ -1.75
RTN3O95197 RPL23AP35-201ENST00000451906 501 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.14□□□□□ -1.75
RTN3O95197 AL109741.2-201ENST00000455561 343 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.14□□□□□ -1.75
RTN3O95197 RPS4XP10-201ENST00000465034 731 ntBASIC4.14□□□□□ -1.75
RTN3O95197 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.14□□□□□ -1.75
RTN3O95197 ST13P14-201ENST00000474095 734 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AL049830.2-201ENST00000480072 201 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AC023424.2-201ENST00000493479 777 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AC147055.4-201ENST00000504399 745 ntBASIC4.14□□□□□ -1.75
RTN3O95197 HMGB1P22-201ENST00000505315 124 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.14□□□□□ -1.75
RTN3O95197 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.14□□□□□ -1.75
RTN3O95197 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RTN3O95197 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.14□□□□□ -1.75
RTN3O95197 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.14□□□□□ -1.75
RTN3O95197 RNU2-58P-201ENST00000516403 183 ntBASIC4.14□□□□□ -1.75
RTN3O95197 RNA5SP309-201ENST00000516670 106 ntBASIC4.14□□□□□ -1.75
RTN3O95197 SNORA31.20-201ENST00000517111 133 ntBASIC4.14□□□□□ -1.75
RTN3O95197 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.14□□□□□ -1.75
RTN3O95197 MED28P5-201ENST00000528254 438 ntBASIC4.14□□□□□ -1.75
RTN3O95197 OR5D17P-201ENST00000531492 978 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AC109635.4-202ENST00000531666 412 ntBASIC4.14□□□□□ -1.75
RTN3O95197 UBE2NP1-201ENST00000545592 458 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AC126177.3-201ENST00000551839 688 ntBASIC4.14□□□□□ -1.75
RTN3O95197 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.14□□□□□ -1.75
RTN3O95197 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.14□□□□□ -1.75
RTN3O95197 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.14□□□□□ -1.75
RTN3O95197 MIR3186-201ENST00000577404 85 ntBASIC4.14□□□□□ -1.75
RTN3O95197 MIR5047-201ENST00000579212 100 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.14□□□□□ -1.75
RTN3O95197 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.14□□□□□ -1.75
RTN3O95197 AL390208.1-201ENST00000605885 644 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AL355493.4-201ENST00000618530 292 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AL445264.1-201ENST00000621719 171 ntBASIC4.14□□□□□ -1.75
RTN3O95197 AC103706.2-201ENST00000638080 240 ntBASIC4.14□□□□□ -1.75
RTN3O95197 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms