Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC010627.1-201ENST00000503819 1294 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AC005351.1-201ENST00000511152 786 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 RNA5SP200-201ENST00000516360 103 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AC106785.1-201ENST00000565935 262 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 ELOCP29-201ENST00000588193 334 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AC002984.1-201ENST00000591692 448 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AC009159.1-201ENST00000618386 642 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AC090897.3-201ENST00000636973 1157 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 FTO-223ENST00000640179 210 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
LINC01549A6NIU2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
LINC01549A6NIU2 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01549A6NIU2 EI24P1-201ENST00000416584 867 ntBASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01549A6NIU2 IPO7P1-201ENST00000442031 636 ntBASIC1.59□□□□□ -2.15
LINC01549A6NIU2 NECAP1P2-201ENST00000455668 727 ntBASIC1.59□□□□□ -2.15
LINC01549A6NIU2 RN7SL542P-201ENST00000467147 294 ntBASIC1.59□□□□□ -2.15
LINC01549A6NIU2 RPL23AP55-201ENST00000498163 452 ntBASIC1.59□□□□□ -2.15
LINC01549A6NIU2 DSTNP2-201ENST00000504533 515 ntBASIC1.59□□□□□ -2.15
LINC01549A6NIU2 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AC093281.2-201ENST00000510153 597 ntBASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AC026436.1-201ENST00000510537 270 ntBASIC1.59□□□□□ -2.15
LINC01549A6NIU2 OR5H4P-201ENST00000510851 923 ntBASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AC026241.1-201ENST00000517873 2142 ntBASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AP003385.6-201ENST00000531603 374 ntBASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC01549A6NIU2 OR4K7P-201ENST00000580232 945 ntBASIC1.59□□□□□ -2.15
LINC01549A6NIU2 MIR3935-201ENST00000583472 104 ntBASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AC009314.1-201ENST00000603871 304 ntBASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AC103810.6-201ENST00000606708 136 ntBASIC1.59□□□□□ -2.15
LINC01549A6NIU2 AC107294.1-201ENST00000609524 467 ntBASIC1.59□□□□□ -2.15
LINC01549A6NIU2 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01549A6NIU2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
LINC01549A6NIU2 AC091564.4-201ENST00000533934 2194 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
LINC01549A6NIU2 SNORA67.4-201ENST00000384688 142 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 RNA5SP338-201ENST00000410495 85 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AL024507.1-201ENST00000412741 274 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AC241520.1-201ENST00000422654 1099 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 FCF1P1-201ENST00000432690 571 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AC103987.1-201ENST00000473394 348 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AC068587.1-201ENST00000483613 781 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AC093663.2-201ENST00000484625 313 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AC022493.1-201ENST00000492984 337 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AC023050.1-201ENST00000498198 304 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AC008413.1-201ENST00000511864 177 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AC022080.3-201ENST00000544433 482 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 ANP32BP3-201ENST00000559213 706 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01549A6NIU2 VIS1.1-201ENST00000610517 203 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AC068831.7-201ENST00000616954 363 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01549A6NIU2 uc_338.20-201ENST00000621563 178 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AC069528.2-201ENST00000624849 1991 ntBASIC1.58□□□□□ -2.16
LINC01549A6NIU2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.57□□□□□ -2.16
LINC01549A6NIU2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
LINC01549A6NIU2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
LINC01549A6NIU2 RNA5SP374-201ENST00000362939 125 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 MIR153-1-201ENST00000384914 90 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 RNU2-71P-201ENST00000411395 189 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 RPL26P37-201ENST00000411983 438 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 AC105272.1-201ENST00000438604 198 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 AL135938.1-201ENST00000443141 297 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 AL121871.1-201ENST00000443413 436 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 AL353898.1-201ENST00000444055 238 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
LINC01549A6NIU2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.57□□□□□ -2.16
LINC01549A6NIU2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC1.57□□□□□ -2.16
LINC01549A6NIU2 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.57□□□□□ -2.16
LINC01549A6NIU2 AL021397.1-201ENST00000451806 248 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 NF1P3-201ENST00000457709 450 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 AC114322.1-201ENST00000506771 926 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.57□□□□□ -2.16
LINC01549A6NIU2 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms