Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 MIR5195-201ENST00000583555 115 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 AC125494.3-201ENST00000602759 455 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 AC079880.2-201ENST00000603790 1213 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 AL645944.1-201ENST00000603857 493 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 NUTF2P8-201ENST00000604593 363 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 AC106791.2-201ENST00000604680 391 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 AL359693.1-201ENST00000614959 2407 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 OR52E6-202ENST00000379946 954 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 AL138827.1-201ENST00000402666 306 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 RNA5SP38-201ENST00000410750 119 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 AC007064.1-201ENST00000412238 351 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 RPL23AP74-201ENST00000437246 471 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 AC011753.1-201ENST00000451001 220 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 AL035407.2-201ENST00000454090 378 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 RPL23AP31-201ENST00000456160 467 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 RBM43P1-201ENST00000476891 1081 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 MTND3P6-201ENST00000485242 339 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 RPS27P27-201ENST00000498779 255 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 HMGB3P3-201ENST00000510526 400 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 AC107222.1-201ENST00000510899 637 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 SNORA74D-201ENST00000516404 141 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 CIR1P1-201ENST00000524055 1133 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 AC121758.2-201ENST00000553271 193 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 AL137847.3-201ENST00000611521 109 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 AC245517.5-201ENST00000611529 162 ntBASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
TRAV30A0A087WSZ9 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
TRAV30A0A087WSZ9 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.09□□□□□ -2.08
TRAV30A0A087WSZ9 AC073346.2-201ENST00000624724 2058 ntBASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 MIR23B-201ENST00000384832 97 ntBASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 MIR9-1-201ENST00000385198 89 ntBASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 UBA52P6-201ENST00000399822 382 ntBASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 AL139132.1-201ENST00000431587 344 ntBASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 AC112220.1-201ENST00000434628 355 ntBASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 RPS24P13-201ENST00000442520 397 ntBASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 HMGB1P15-201ENST00000453854 435 ntBASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 RN7SKP277-201ENST00000516895 283 ntBASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 SNORA31.21-201ENST00000517180 77 ntBASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 AP004371.1-201ENST00000525240 214 ntBASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 AC025423.2-201ENST00000537570 439 ntBASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 MIR4635-201ENST00000583759 79 ntBASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 AC245389.2-201ENST00000616023 576 ntBASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 AC243756.2-201ENST00000618406 463 ntBASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 AC242843.1-201ENST00000618702 573 ntBASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
TRAV30A0A087WSZ9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 Z75741.2-201ENST00000417272 1167 ntBASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 USP9YP27-201ENST00000418455 438 ntBASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 MORF4L1P6-201ENST00000418771 268 ntBASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 AC092427.1-202ENST00000430569 476 ntBASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 NANOGNBP1-201ENST00000448444 480 ntBASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 RPS4XP6-201ENST00000477670 797 ntBASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 HIGD1AP13-201ENST00000509878 289 ntBASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 OR5BN1P-201ENST00000532955 829 ntBASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 AC007336.1-201ENST00000576365 3828 ntBASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 ISCA1P3-201ENST00000577104 373 ntBASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 MIR1254-2-201ENST00000579553 63 ntBASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 VN1R78P-201ENST00000597393 564 ntBASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms