Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AC093809.1-201ENST00000509155 340 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AC099522.1-202ENST00000514718 367 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 OR6C73P-201ENST00000546432 358 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AC074029.1-201ENST00000552531 1044 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AC084757.1-201ENST00000559987 490 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AC141257.3-201ENST00000572906 215 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 MIR5186-201ENST00000577504 120 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 MIR4801-201ENST00000582704 82 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AL161729.3-201ENST00000603533 673 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AL139395.1-201ENST00000603662 160 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 RNU4-89P-201ENST00000607443 133 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AC138749.5-201ENST00000611461 208 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AL589743.7-201ENST00000612637 233 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AL357080.1-201ENST00000617394 239 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AL161637.1-201ENST00000622380 412 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AL160394.1-201ENST00000624765 724 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AC005832.2-201ENST00000538921 1430 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 RN7SKP280-201ENST00000364196 304 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 RNU6-441P-201ENST00000384545 106 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 MIR134-201ENST00000385258 73 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 IQCB2P-201ENST00000401788 1633 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 RNA5SP239-201ENST00000410218 129 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 RN7SKP235-201ENST00000410662 305 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 SNORA74C-2-201ENST00000411179 201 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 RPL36AP36-201ENST00000418616 301 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC004552.1-201ENST00000419089 348 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 COX6B1P7-201ENST00000430845 235 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC091862.1-201ENST00000438016 1100 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 RPL23AP16-201ENST00000441715 421 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 PDSS1P2-201ENST00000449397 678 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 RPS26P3-201ENST00000470205 348 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 MTND6P6-201ENST00000478031 263 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 RN7SL132P-201ENST00000478131 296 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC090543.2-201ENST00000483963 348 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC004057.1-201ENST00000485827 348 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 FAM172BP-201ENST00000487497 1089 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC109927.2-201ENST00000506416 303 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 MTND2P33-201ENST00000506452 1031 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 RPL37P25-201ENST00000507308 276 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC117529.2-201ENST00000512159 2068 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 RN7SKP298-201ENST00000515950 94 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC008694.2-201ENST00000517591 306 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 IGLVIV-53-201ENST00000520107 367 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 MED28P5-201ENST00000528254 438 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC105233.3-201ENST00000531125 744 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 LSM6P2-201ENST00000552208 177 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC007424.1-203ENST00000554613 687 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 HSPE1P3-201ENST00000559254 309 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 NF1P5-201ENST00000588287 448 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 BNIP3P33-201ENST00000598912 569 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 SEPT7P9-203ENST00000604116 343 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC090186.1-201ENST00000605991 572 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AC027807.2-201ENST00000616099 408 ntBASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX2IPQ9Y2D8 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.59□□□□□ -1.68
SSX2IPQ9Y2D8 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.59□□□□□ -1.68
SSX2IPQ9Y2D8 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms