Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU1-74P-201ENST00000384108 171 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 MIR191-201ENST00000384873 92 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 AC013442.1-201ENST00000397347 228 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 RPS4XP9-201ENST00000405151 780 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 RNU2-36P-201ENST00000410361 191 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 VDAC1P9-201ENST00000412766 841 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 AL591848.1-201ENST00000413092 322 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 AC018865.2-201ENST00000423631 129 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 SRSF1P1-201ENST00000424058 520 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 AL031736.2-201ENST00000426573 787 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 RPS19P6-201ENST00000441327 433 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 AL731563.1-201ENST00000442202 214 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 RPL30P15-201ENST00000457129 321 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 RN7SL189P-201ENST00000468631 289 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 RPL21P93-201ENST00000480465 489 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 RPL30P11-201ENST00000495304 339 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 AC025458.1-201ENST00000506046 166 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSU72Q9NP77 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.25□□□□□ -1.57
SSU72Q9NP77 RNU7-51P-201ENST00000516560 62 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 RNU6-256P-201ENST00000516747 97 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 NRBF2P4-201ENST00000520874 850 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.25□□□□□ -1.57
SSU72Q9NP77 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.25□□□□□ -1.57
SSU72Q9NP77 AL669831.4-202ENST00000590817 238 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.25□□□□□ -1.57
SSU72Q9NP77 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.25□□□□□ -1.57
SSU72Q9NP77 AC008814.1-201ENST00000603797 406 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.25□□□□□ -1.57
SSU72Q9NP77 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.25□□□□□ -1.57
SSU72Q9NP77 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.25□□□□□ -1.57
SSU72Q9NP77 AC006484.1-201ENST00000435086 1884 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSU72Q9NP77 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.25□□□□□ -1.57
SSU72Q9NP77 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SSU72Q9NP77 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SSU72Q9NP77 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSU72Q9NP77 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.25□□□□□ -1.57
SSU72Q9NP77 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSU72Q9NP77 AC104260.2-201ENST00000623551 3497 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 RNU6-1115P-201ENST00000362490 106 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 SNORD113-7-201ENST00000363762 77 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 Y_RNA.212-201ENST00000364177 102 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSU72Q9NP77 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 U3.32-201ENST00000408116 212 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 AC068533.1-201ENST00000418542 415 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 AL133173.1-201ENST00000423458 397 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 FABP7P2-201ENST00000429946 379 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 AL389925.1-201ENST00000432257 728 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 AL035666.1-201ENST00000446195 348 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 AL161722.1-201ENST00000446972 1032 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 MTND1P17-201ENST00000448961 204 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 KF459542.1-201ENST00000450908 553 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 AC098818.1-201ENST00000478593 252 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 RN7SL809P-201ENST00000482040 297 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 AL139099.1-201ENST00000497398 403 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSU72Q9NP77 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 RNU2-10P-201ENST00000516375 211 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 snoU109.6-201ENST00000516831 118 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 RNU6-1213P-201ENST00000517075 94 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 AL137161.1-201ENST00000532231 390 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 MIR5690-201ENST00000583739 73 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 AC005014.2-201ENST00000607795 599 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 DUSP12P1-201ENST00000612874 516 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 AC008013.2-202ENST00000637965 364 ntBASIC5.24□□□□□ -1.57
SSU72Q9NP77 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSU72Q9NP77 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.24□□□□□ -1.57
SSU72Q9NP77 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSU72Q9NP77 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSU72Q9NP77 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSU72Q9NP77 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSU72Q9NP77 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSU72Q9NP77 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSU72Q9NP77 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSU72Q9NP77 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms