Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 RN7SKP126-201ENST00000411143 300 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AC009238.2-201ENST00000431026 355 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 CYCSP24-201ENST00000445119 316 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AC079781.2-201ENST00000446424 169 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AL356010.1-201ENST00000456364 102 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AL590639.1-201ENST00000456484 337 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 Y_RNA.631-201ENST00000459607 101 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AK3P4-201ENST00000504283 583 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AC004062.1-201ENST00000509926 645 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 BTF3P13-201ENST00000513224 490 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 RNU6-559P-201ENST00000516151 98 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 RNU6-1046P-201ENST00000516538 107 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AC093012.1-202ENST00000549403 582 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AL355836.1-201ENST00000555951 870 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AL353997.4-201ENST00000586196 166 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 SNRPGP17-201ENST00000603780 214 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AL627309.6-201ENST00000606857 840 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AL355816.1-201ENST00000607951 118 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AC040168.1-201ENST00000623594 991 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 STX3-208ENST00000641815 3236 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC092447.10-201ENST00000620607 1652 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 HSPA8P18-201ENST00000439846 1928 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC067945.1-201ENST00000342609 618 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 SNORA33.2-201ENST00000365413 134 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 Y_RNA.373-201ENST00000365600 103 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 RNU4-20P-201ENST00000365601 151 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 Y_RNA.422-201ENST00000384054 114 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 RNU6-1207P-201ENST00000384343 107 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 RPL5P18-201ENST00000406671 891 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 SPTLC1P2-201ENST00000407089 121 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 MIR1271-201ENST00000408537 86 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 RNA5SP296-201ENST00000410523 111 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC245054.2-201ENST00000415639 319 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 OR4K11P-201ENST00000431829 904 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 LYPLA1P1-201ENST00000434514 622 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 GTF2IP13-201ENST00000438487 386 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 PTMAP6-201ENST00000439110 327 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 HMGB1P15-201ENST00000453854 435 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AL389915.2-201ENST00000454576 441 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 RN7SL443P-201ENST00000464331 290 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 MTCO2P29-201ENST00000465212 189 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AP000893.1-201ENST00000474462 794 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC090096.1-201ENST00000489168 390 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC106872.2-201ENST00000494303 480 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 RNU4-29P-201ENST00000515943 174 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 OR5B10P-201ENST00000532869 642 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC068831.4-201ENST00000556118 109 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 OR4K8P-201ENST00000578842 1048 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC106900.2-201ENST00000604994 317 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC016925.2-201ENST00000605108 242 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC080078.3-201ENST00000605407 463 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 RNU6-89P-201ENST00000606519 100 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AP001521.2-201ENST00000608772 546 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC009318.4-201ENST00000620496 486 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms