Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 AC097461.1-201ENST00000568928 2821 ntBASIC5.38□□□□□ -1.55
BHLHE41Q9C0J9 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BHLHE41Q9C0J9 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AC093775.1-201ENST00000624154 1868 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AC125336.1-201ENST00000508893 2827 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AC092681.1-201ENST00000297369 291 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 RNA5SP326-201ENST00000363209 110 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 RNU6-1284P-201ENST00000363701 100 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 Y_RNA.476-201ENST00000384347 108 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 SNORD3H-201ENST00000384486 214 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 FTLP19-201ENST00000433300 394 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 RPL21P112-201ENST00000434403 463 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 FABP5P13-201ENST00000452144 328 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 CECR9-201ENST00000453421 199 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AC234775.1-201ENST00000454247 670 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 SETP20-201ENST00000457046 852 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 DYNLL1P5-201ENST00000467158 270 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AC006499.3-201ENST00000506077 748 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 MRPS35P2-201ENST00000508242 191 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AC116337.1-201ENST00000509680 687 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 Y_RNA.708-201ENST00000516950 96 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 RNU6-1271P-201ENST00000517049 105 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 RNU1-54P-201ENST00000517181 120 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AC021678.3-201ENST00000517893 476 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AP000859.1-201ENST00000525536 307 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AP000648.1-201ENST00000529682 397 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AC122688.1-201ENST00000541494 223 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 GSTP1P1-201ENST00000548078 319 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 SETP7-201ENST00000552169 453 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AL354984.3-201ENST00000604803 325 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 MIR6133-201ENST00000617057 108 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 AC007938.2-201ENST00000604666 2634 ntBASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BHLHE41Q9C0J9 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 AL159987.1-201ENST00000347911 293 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 Y_RNA.252-201ENST00000364556 101 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 RN7SKP275-201ENST00000364626 301 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 Y_RNA.463-201ENST00000384271 102 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 AC005522.1-201ENST00000395416 346 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 HMGB3P2-201ENST00000411913 584 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 AC009302.1-201ENST00000417147 390 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 AL354766.1-201ENST00000423396 542 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 MRPS21P2-201ENST00000424704 264 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 Z98949.2-201ENST00000440996 144 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 MED28P3-201ENST00000444288 531 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 AC010655.1-201ENST00000449336 292 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 YWHAEP1-201ENST00000453697 763 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 RPS20P21-201ENST00000466859 343 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 RPL32P33-201ENST00000487023 394 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 AC009120.1-201ENST00000493458 473 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 AP002812.1-201ENST00000495378 474 ntBASIC5.36□□□□□ -1.55
BHLHE41Q9C0J9 AC010350.1-201ENST00000504908 231 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms