Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 U3.3-201ENST00000362986 216 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 RN7SKP224-201ENST00000364140 325 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 RNY4P16-201ENST00000364768 94 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 Y_RNA.315-201ENST00000365117 102 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 RPL7P60-201ENST00000397636 735 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AL133270.1-201ENST00000402635 279 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AL356421.1-201ENST00000403255 413 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 Y_RNA.625-201ENST00000411256 107 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AC004987.3-201ENST00000413879 771 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AC096632.1-201ENST00000427395 310 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 HMGB1P18-201ENST00000438801 619 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 DDX3P2-201ENST00000446138 111 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AC005297.2-201ENST00000450430 606 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AL389915.2-201ENST00000454576 441 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 CYCSP34-201ENST00000458172 304 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 HMGN2P26-201ENST00000463169 339 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 MRPS17P3-201ENST00000465453 385 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 BX284632.1-201ENST00000478218 541 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AC090686.1-201ENST00000481577 749 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 RPL23AP41-201ENST00000484754 458 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 RN7SL97P-201ENST00000486780 299 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 RNU6-410P-201ENST00000517006 107 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 RNA5SP337-201ENST00000517007 109 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 SCOCP1-201ENST00000554676 349 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AC068831.4-201ENST00000556118 109 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 OR1F2P-201ENST00000570470 933 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AC007151.1-201ENST00000572774 483 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AC098848.2-201ENST00000588023 330 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AC069307.1-201ENST00000602820 447 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AC134503.1-201ENST00000633048 54 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 OR2L1P-202ENST00000641567 1023 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 XPOTP1-201ENST00000443317 2398 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 AC107027.3-201ENST00000565095 3473 ntBASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
FOXP3Q9BZS1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 RNA5SP443-201ENST00000363083 132 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 RN7SKP113-201ENST00000363891 295 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 Y_RNA.384-201ENST00000383909 102 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 RNU6-606P-201ENST00000384721 111 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 MIR606-201ENST00000384851 96 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 AC127526.1-201ENST00000417526 366 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 AL645937.1-202ENST00000421799 937 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 RPL36P19-201ENST00000430744 301 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 RPS26P56-201ENST00000444468 240 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 RNU6-1218P-201ENST00000458990 108 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 RNU6-329P-201ENST00000459618 107 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 AC078785.3-201ENST00000476607 425 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 AL163973.1-201ENST00000484753 577 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 AC020890.1-201ENST00000491837 504 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 RPL23AP72-201ENST00000492447 435 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 SNRPCP2-201ENST00000504370 475 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 SCARNA24.1-201ENST00000516465 137 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 AL390726.5-202ENST00000564800 256 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 AC093249.1-201ENST00000567049 203 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 MIR4646-201ENST00000580775 63 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 AC006116.3-201ENST00000592968 361 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 AC090948.1-201ENST00000607464 549 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 AL133215.3-201ENST00000609801 448 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 AC104237.2-201ENST00000612456 443 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms