Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 APOOP4-201ENST00000513530 597 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 MTND4LP31-201ENST00000514859 294 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 RNA5SP217-201ENST00000515959 91 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 RN7SKP21-201ENST00000516503 220 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 RNU6-1261P-201ENST00000517194 104 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC087808.1-201ENST00000520501 361 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 OR10V3P-201ENST00000525712 725 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 LRRC6P1-201ENST00000532188 885 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AP004242.1-201ENST00000533701 349 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC090502.2-201ENST00000549267 280 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 MTCYBP27-201ENST00000555160 670 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 ZNF192P1-203ENST00000565888 810 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 MTND1P8-201ENST00000571424 950 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 MIR4509-3-201ENST00000578671 94 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 MIR4509-2-201ENST00000583920 94 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 BNIP3P40-201ENST00000596017 556 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 RPP40P2-201ENST00000603596 712 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC106052.1-201ENST00000608029 497 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AP001521.1-201ENST00000609150 300 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AL450489.1-201ENST00000612071 468 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC008083.4-201ENST00000615076 444 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 MIR4509-1-201ENST00000618224 94 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC018816.2-201ENST00000621460 353 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC009093.8-201ENST00000641769 292 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AP001148.1-201ENST00000624124 2359 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 MTND5P24-201ENST00000438892 1767 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AF117829.1-206ENST00000621883 3802 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 ZNF29P-201ENST00000225587 168 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 RNU6-989P-201ENST00000362756 107 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 SNORD116-12-201ENST00000384468 92 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 ERHP2-201ENST00000402323 299 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AL136310.1-201ENST00000404926 654 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 HSPE1P26-201ENST00000405341 275 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 BX323014.1-201ENST00000412876 237 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 MTATP6P20-201ENST00000414147 562 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AC007390.1-201ENST00000415722 356 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AC244098.2-201ENST00000422068 99 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 DPRXP1-201ENST00000426312 460 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AL035246.1-201ENST00000433554 1255 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 RBMY2UP-201ENST00000453474 324 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 TRBV26-201ENST00000456572 344 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AC069528.1-202ENST00000482888 637 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AC023141.12-201ENST00000512399 199 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 ZNF705CP-201ENST00000530515 889 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AC084824.1-201ENST00000550917 1005 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 LARP7P2-201ENST00000575306 125 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 GAS5-AS1-201ENST00000602767 694 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 MTND3P19-201ENST00000603825 345 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AL157392.4-201ENST00000609756 345 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AC024941.1-201ENST00000612250 334 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AC121761.2-201ENST00000617300 689 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 AC068831.8-201ENST00000620171 435 ntBASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
HDHD3Q9BSH5 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HDHD3Q9BSH5 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HDHD3Q9BSH5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
HDHD3Q9BSH5 ZNF734P-201ENST00000419494 1534 ntBASIC2.73□□□□□ -1.97
HDHD3Q9BSH5 AC109315.1-201ENST00000584143 1347 ntBASIC2.73□□□□□ -1.97
HDHD3Q9BSH5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms