Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 OR1L1-202ENST00000373686 1083 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 RNU6-837P-201ENST00000391056 108 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 TAF13P2-201ENST00000416876 286 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 FNDC3CP-201ENST00000420795 1155 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 AC234064.1-201ENST00000436312 247 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 NPM1P13-201ENST00000452663 865 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 RPS24P6-201ENST00000452670 400 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 AC010285.1-201ENST00000470580 392 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 CAB39P1-201ENST00000502277 460 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 AC021146.5-201ENST00000503544 545 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 AC109471.1-201ENST00000511631 612 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 RNU1-61P-201ENST00000516107 151 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 RNU6-334P-201ENST00000517072 102 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 AP003049.1-201ENST00000529418 457 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 AP003168.1-201ENST00000530091 307 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 AL451074.6-201ENST00000608512 729 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 AC107294.3-201ENST00000609211 526 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 AL162574.2-201ENST00000614618 657 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RPRD1AQ96P16 RNU6-805P-201ENST00000365643 106 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 AP002088.1-201ENST00000382740 395 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 RNU6-354P-201ENST00000383862 107 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 RNU6-761P-201ENST00000384148 107 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 RNU6-610P-201ENST00000384264 107 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 RNA5SP229-201ENST00000410809 99 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.33□□□□□ -1.88
RPRD1AQ96P16 AL353678.1-201ENST00000422735 741 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.33□□□□□ -1.88
RPRD1AQ96P16 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.33□□□□□ -1.88
RPRD1AQ96P16 FO393414.1-201ENST00000428697 1184 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 HMGB3P11-201ENST00000440127 604 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 Z99127.3-201ENST00000448158 395 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 AL034418.1-201ENST00000448675 860 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.33□□□□□ -1.88
RPRD1AQ96P16 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.33□□□□□ -1.88
RPRD1AQ96P16 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 RPS26P21-201ENST00000475397 348 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.33□□□□□ -1.88
RPRD1AQ96P16 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.33□□□□□ -1.88
RPRD1AQ96P16 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 RNA5SP468-201ENST00000516782 93 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 SNORA31.20-201ENST00000517111 133 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.33□□□□□ -1.88
RPRD1AQ96P16 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.33□□□□□ -1.88
RPRD1AQ96P16 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.33□□□□□ -1.88
RPRD1AQ96P16 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPRD1AQ96P16 AC006518.1-201ENST00000541449 943 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 MIR5195-201ENST00000583555 115 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 SNORD39.3-201ENST00000584451 71 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.33□□□□□ -1.88
RPRD1AQ96P16 VIS1.1-201ENST00000610517 203 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 AC006963.1-201ENST00000624003 1052 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.33□□□□□ -1.88
RPRD1AQ96P16 BX649567.1-201ENST00000642071 1134 ntBASIC3.33□□□□□ -1.88
RPRD1AQ96P16 SNORA11.1-201ENST00000408133 129 ntBASIC3.32□□□□□ -1.88
RPRD1AQ96P16 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.32□□□□□ -1.88
RPRD1AQ96P16 AL035410.1-201ENST00000427409 427 ntBASIC3.32□□□□□ -1.88
RPRD1AQ96P16 OR2B8P-201ENST00000432841 938 ntBASIC3.32□□□□□ -1.88
RPRD1AQ96P16 RPS7P2-201ENST00000435134 607 ntBASIC3.32□□□□□ -1.88
RPRD1AQ96P16 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.32□□□□□ -1.88
RPRD1AQ96P16 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.32□□□□□ -1.88
RPRD1AQ96P16 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.32□□□□□ -1.88
RPRD1AQ96P16 AL096829.2-201ENST00000446582 742 ntBASIC3.32□□□□□ -1.88
RPRD1AQ96P16 AC104308.1-201ENST00000454621 333 ntBASIC3.32□□□□□ -1.88
RPRD1AQ96P16 NECAP1P2-201ENST00000455668 727 ntBASIC3.32□□□□□ -1.88
RPRD1AQ96P16 snoU13.24-201ENST00000458998 104 ntBASIC3.32□□□□□ -1.88
RPRD1AQ96P16 RPL21P8-201ENST00000465083 535 ntBASIC3.32□□□□□ -1.88
RPRD1AQ96P16 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.32□□□□□ -1.88
RPRD1AQ96P16 AC109925.1-201ENST00000478069 331 ntBASIC3.32□□□□□ -1.88
RPRD1AQ96P16 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.32□□□□□ -1.88
RPRD1AQ96P16 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.32□□□□□ -1.88
RPRD1AQ96P16 POU5F1P7-201ENST00000508759 541 ntBASIC3.32□□□□□ -1.88
RPRD1AQ96P16 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.32□□□□□ -1.88
RPRD1AQ96P16 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.32□□□□□ -1.88
RPRD1AQ96P16 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.32□□□□□ -1.88
RPRD1AQ96P16 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.32□□□□□ -1.88
RPRD1AQ96P16 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.32□□□□□ -1.88
RPRD1AQ96P16 AL442067.2-201ENST00000614033 363 ntBASIC3.32□□□□□ -1.88
RPRD1AQ96P16 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.32□□□□□ -1.88
RPRD1AQ96P16 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RPRD1AQ96P16 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms