Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC012065.4-201ENST00000602445 679 ntBASIC4.51□□□□□ -1.69
CCDC17Q96LX7 AC087241.4-201ENST00000612441 480 ntBASIC4.51□□□□□ -1.69
CCDC17Q96LX7 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC17Q96LX7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.51□□□□□ -1.69
CCDC17Q96LX7 AL356596.1-201ENST00000624230 379 ntBASIC4.51□□□□□ -1.69
CCDC17Q96LX7 AC025048.6-202ENST00000627667 438 ntBASIC4.51□□□□□ -1.69
CCDC17Q96LX7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC17Q96LX7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC17Q96LX7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC17Q96LX7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
CCDC17Q96LX7 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC17Q96LX7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC17Q96LX7 AC096656.1-201ENST00000623826 1364 ntBASIC4.51□□□□□ -1.69
CCDC17Q96LX7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC17Q96LX7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC17Q96LX7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC17Q96LX7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AL079343.1-201ENST00000572358 1771 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 LINC01355-201ENST00000566551 5444 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC106871.1-201ENST00000568324 3102 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 SNORA73.2-201ENST00000364946 201 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 MIR670-201ENST00000390142 98 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 RNA5SP171-201ENST00000391071 115 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC007899.1-201ENST00000412776 775 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 CYCSP10-201ENST00000417973 294 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 RPS12P5-201ENST00000423449 371 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 RPL37P1-201ENST00000432310 284 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 RPS26P40-201ENST00000435209 294 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AL592447.1-201ENST00000447592 540 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 NPM1P49-201ENST00000448027 714 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC096751.1-202ENST00000502691 1067 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC108941.1-201ENST00000502853 530 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC027309.2-201ENST00000520566 192 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC087276.1-201ENST00000529659 480 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 MIR548AB-201ENST00000584917 84 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC092794.1-201ENST00000612734 582 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC013476.2-201ENST00000614456 459 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC068137.3-201ENST00000639191 341 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC073869.6-201ENST00000640656 341 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC010329.2-201ENST00000595195 2737 ntBASIC4.5□□□□□ -1.69
CCDC17Q96LX7 AC024560.2-201ENST00000507981 1497 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 RPL21P17-201ENST00000397467 475 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 RNU2-66P-201ENST00000410650 161 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AC009302.1-201ENST00000417147 390 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 IPMKP1-201ENST00000425988 855 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AL365184.2-201ENST00000431139 435 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 MTND2P20-201ENST00000440805 661 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 EEF1E1P1-201ENST00000446998 430 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AC073587.1-201ENST00000447093 876 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 RPS17P13-201ENST00000448974 407 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 RPS15AP1-201ENST00000457423 391 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 RPL9P33-201ENST00000484311 566 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 OR4G11P-201ENST00000492842 939 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 MTND2P33-201ENST00000506452 1031 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 ARL2BPP4-201ENST00000506854 471 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 RPL37P25-201ENST00000507308 276 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 CDC42P4-201ENST00000510507 563 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 RNU6-583P-201ENST00000516012 92 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 RNA5SP143-201ENST00000516936 115 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AC090502.2-201ENST00000549267 280 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AC068714.1-201ENST00000559623 800 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms