Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.74□□□□□ -1.65
HPS3Q969F9 AL590365.1-201ENST00000450788 243 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 AL033528.1-201ENST00000453780 140 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 AC133473.1-201ENST00000455173 299 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 MTCO1P42-201ENST00000457379 726 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 AC011276.1-201ENST00000469688 323 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 COX7A2P2-201ENST00000505291 250 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 KCTD9P2-201ENST00000512203 1013 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.74□□□□□ -1.65
HPS3Q969F9 AC108064.1-201ENST00000513791 460 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 MTND4LP31-201ENST00000514859 294 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 PAICSP4-201ENST00000517543 1253 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 OR4R3P-201ENST00000525084 838 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.74□□□□□ -1.65
HPS3Q969F9 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HPS3Q969F9 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.74□□□□□ -1.65
HPS3Q969F9 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.74□□□□□ -1.65
HPS3Q969F9 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.74□□□□□ -1.65
HPS3Q969F9 AC068790.6-201ENST00000602558 258 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.74□□□□□ -1.65
HPS3Q969F9 AC013562.2-201ENST00000611632 603 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 AC138932.5-201ENST00000617759 563 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 AC011944.2-201ENST00000624440 683 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.74□□□□□ -1.65
HPS3Q969F9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
HPS3Q969F9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
HPS3Q969F9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
HPS3Q969F9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
HPS3Q969F9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.74□□□□□ -1.65
HPS3Q969F9 AC012020.1-201ENST00000624541 1728 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.74□□□□□ -1.65
HPS3Q969F9 NMD3P1-201ENST00000439704 1488 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.74□□□□□ -1.65
HPS3Q969F9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HPS3Q969F9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HPS3Q969F9 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
HPS3Q969F9 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.73□□□□□ -1.65
HPS3Q969F9 AC068254.2-201ENST00000623938 3577 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HPS3Q969F9 AL356489.2-201ENST00000566968 3528 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.73□□□□□ -1.65
HPS3Q969F9 RNA5SP258-201ENST00000362750 119 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 RNU1-132P-201ENST00000364300 164 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
HPS3Q969F9 SNORA75-201ENST00000384158 137 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 AL049693.1-201ENST00000402760 611 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 RPL23AP48-201ENST00000406913 488 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 RN7SKP235-201ENST00000410662 305 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.73□□□□□ -1.65
HPS3Q969F9 HMGN1P14-201ENST00000412459 517 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 USP9YP13-201ENST00000417797 480 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.73□□□□□ -1.65
HPS3Q969F9 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.73□□□□□ -1.65
HPS3Q969F9 HLA-N-201ENST00000437516 135 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 RPL22P17-201ENST00000438729 315 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.73□□□□□ -1.65
HPS3Q969F9 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.73□□□□□ -1.65
HPS3Q969F9 Z95327.1-201ENST00000446082 482 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 snoU109.1-201ENST00000459339 135 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.73□□□□□ -1.65
HPS3Q969F9 RN7SL691P-201ENST00000494487 301 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 VWA8P1-201ENST00000510889 176 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 PTGES3P3-201ENST00000511479 482 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 AC015795.1-201ENST00000513669 327 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.73□□□□□ -1.65
HPS3Q969F9 RNU6-27P-201ENST00000516146 107 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 RNA5SP519-201ENST00000516480 119 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HPS3Q969F9 AC022878.1-201ENST00000530684 149 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 AC006064.5-201ENST00000541782 248 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.73□□□□□ -1.65
HPS3Q969F9 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HPS3Q969F9 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.73□□□□□ -1.65
HPS3Q969F9 MTND6P33-201ENST00000571794 183 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.73□□□□□ -1.65
HPS3Q969F9 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.73□□□□□ -1.65
HPS3Q969F9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.73□□□□□ -1.65
HPS3Q969F9 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.73□□□□□ -1.65
HPS3Q969F9 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.73□□□□□ -1.65
HPS3Q969F9 AL020997.2-201ENST00000602607 184 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 AC078795.2-201ENST00000602835 1252 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 AL359999.1-201ENST00000604513 294 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HPS3Q969F9 AC140479.6-201ENST00000633535 357 ntBASIC4.73□□□□□ -1.65
HPS3Q969F9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.73□□□□□ -1.65
HPS3Q969F9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.73□□□□□ -1.65
HPS3Q969F9 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.73□□□□□ -1.65
HPS3Q969F9 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HPS3Q969F9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HPS3Q969F9 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HPS3Q969F9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.72□□□□□ -1.65
HPS3Q969F9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.72□□□□□ -1.65
HPS3Q969F9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HPS3Q969F9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HPS3Q969F9 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HPS3Q969F9 FAM91A3P-201ENST00000456826 2544 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HPS3Q969F9 AC126755.2-208ENST00000327792 462 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 AC138969.1-213ENST00000331436 462 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 RNU6-97P-201ENST00000363387 104 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms