Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC009501.3-201ENST00000605001 1352 ntBASIC3.07□□□□□ -1.92
CCDC112Q8NEF3 AC000403.1-201ENST00000613696 3585 ntBASIC3.07□□□□□ -1.92
CCDC112Q8NEF3 AC096644.4-201ENST00000563417 2912 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 RNU6-386P-201ENST00000362650 107 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 Y_RNA.500-201ENST00000384466 111 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 RNU1-101P-201ENST00000391171 127 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 AL139095.1-201ENST00000404326 391 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 AC005517.2-201ENST00000424673 553 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 DUTP6-201ENST00000425573 462 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 RNF19BPX-201ENST00000426224 625 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 AC109583.1-201ENST00000432156 268 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 AC023512.1-201ENST00000444513 499 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 RPL23AP20-201ENST00000447965 421 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 AC087190.1-201ENST00000484462 480 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 OR2A20P-203ENST00000498397 1268 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 AC097462.2-201ENST00000504623 481 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 PSMA2P1-201ENST00000526365 646 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 EIF4BP1-201ENST00000554881 351 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 AP001350.1-201ENST00000601906 1524 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 AL137843.1-201ENST00000605078 385 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 BX664608.1-201ENST00000610519 487 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 MIR7106-201ENST00000612419 65 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 AC010297.1-201ENST00000623948 149 ntBASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC112Q8NEF3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 RNU6-629P-201ENST00000384061 103 ntBASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 BTBD10P2-201ENST00000404779 676 ntBASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 AC092638.1-201ENST00000411966 1275 ntBASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 AC022018.1-201ENST00000430685 241 ntBASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 KC877373.1-201ENST00000479066 408 ntBASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 AL160237.3-201ENST00000604114 1013 ntBASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 U6.48-201ENST00000618523 106 ntBASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 AC103988.1-201ENST00000566382 2177 ntBASIC3.05□□□□□ -1.92
CCDC112Q8NEF3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 RNU6-452P-201ENST00000384406 107 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 RPL21P75-201ENST00000396599 483 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 RPL21P28-201ENST00000401418 483 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 AL592114.1-201ENST00000403842 483 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 RPS20P25-201ENST00000412447 352 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 AC109780.2-201ENST00000413467 845 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 RPL35AP12-201ENST00000425362 338 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 AL121578.1-201ENST00000428051 892 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 ARL5AP3-201ENST00000439327 386 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 Z99127.2-201ENST00000441426 334 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 HMGN1P8-201ENST00000463578 288 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 RPL21P39-201ENST00000463605 483 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 AC011979.1-201ENST00000472300 483 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 RPL21P93-201ENST00000480465 489 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 AC233702.1-201ENST00000482905 502 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 AC093591.1-201ENST00000491435 481 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 RPL21P16-201ENST00000495531 483 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 HMGB1P22-201ENST00000505315 124 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 AC117522.3-201ENST00000507974 584 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 AC113192.3-201ENST00000529152 742 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 ZNF861P-201ENST00000588126 639 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 IGHV3-29-201ENST00000604817 344 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 AC006111.3-201ENST00000622137 383 ntBASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CCDC112Q8NEF3 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.03□□□□□ -1.92
CCDC112Q8NEF3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC112Q8NEF3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC112Q8NEF3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC112Q8NEF3 MIR6073-201ENST00000352083 89 ntBASIC3.03□□□□□ -1.92
CCDC112Q8NEF3 OR5H2-201ENST00000355273 945 ntBASIC3.03□□□□□ -1.92
CCDC112Q8NEF3 SNORA71.1-201ENST00000364523 117 ntBASIC3.03□□□□□ -1.92
CCDC112Q8NEF3 DEFB109C-201ENST00000382575 264 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms