Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 Y_RNA.146-201ENST00000363549 102 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNU1-43P-201ENST00000365052 165 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 Y_RNA.378-201ENST00000365652 113 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 Y_RNA.414-201ENST00000384011 101 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 Y_RNA.530-201ENST00000384587 101 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC068533.1-201ENST00000418542 415 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC069213.2-201ENST00000420238 366 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 Y_RNA.635-201ENST00000459041 101 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNU7-66P-201ENST00000459469 62 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC068587.1-201ENST00000483613 781 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 RN7SL629P-201ENST00000489622 285 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 HIGD1AP14-201ENST00000507617 282 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNU2-10P-201ENST00000516375 211 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNU6-1088P-201ENST00000516850 104 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNA5SP503-201ENST00000517047 117 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AP000857.1-201ENST00000532151 543 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL133271.1-201ENST00000538229 291 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL352979.3-201ENST00000553515 247 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC019322.1-201ENST00000571869 389 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 MIR4703-201ENST00000577728 79 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 RN7SL290P-201ENST00000578661 300 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 MIR1269B-201ENST00000580405 75 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL022099.1-201ENST00000604551 712 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL162431.4-201ENST00000604674 411 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AP001521.2-201ENST00000608772 546 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC126915.2-201ENST00000610957 190 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 AP001350.1-201ENST00000601906 1524 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 MIR133A2-201ENST00000347538 102 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNA5SP183-201ENST00000362452 119 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 Y_RNA.144-201ENST00000363521 113 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 Y_RNA.145-201ENST00000363527 102 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 U3.7-201ENST00000363668 216 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 U3.12-201ENST00000364498 214 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 Y_RNA.459-201ENST00000384251 102 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNY4P36-201ENST00000391116 96 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 UBE2V1P2-201ENST00000397758 440 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 MIR548F5-201ENST00000408421 86 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 OR6C66P-201ENST00000414917 930 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 EZH2P1-201ENST00000431167 291 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC092162.1-201ENST00000432828 434 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC239809.1-201ENST00000450470 217 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 COPS8P2-201ENST00000473228 627 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 RPL23AP11-201ENST00000475260 469 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL049874.2-201ENST00000492636 288 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC006427.1-201ENST00000514359 712 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 RFPL4AP5-201ENST00000514977 504 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC109635.4-202ENST00000531666 412 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 DNAJC8P1-201ENST00000554535 372 ntBASIC4.87□□□□□ -1.63
HLA-DQA1Q5Y7H0 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms