Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AP001429.1-201ENST00000602568 530 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 XIAPP1-201ENST00000603162 600 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 RNF138P2-201ENST00000603490 592 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 AC245517.5-201ENST00000611529 162 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 AL592295.2-201ENST00000612578 206 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 uc_338.12-201ENST00000616344 181 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 MIR6130-201ENST00000619419 109 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 AL732618.1-201ENST00000623251 301 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 AC015871.5-202ENST00000623252 701 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SUMO3P55854 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SUMO3P55854 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SUMO3P55854 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SUMO3P55854 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SUMO3P55854 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
SUMO3P55854 ZNF137P-201ENST00000456718 1920 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.25□□□□□ -1.73
SUMO3P55854 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.25□□□□□ -1.73
SUMO3P55854 RNY4P16-201ENST00000364768 94 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SUMO3P55854 RNU6-278P-201ENST00000390945 109 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 MIR921-201ENST00000401133 56 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 AL359643.1-201ENST00000404109 423 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 MIR1271-201ENST00000408537 86 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 RNU2-62P-201ENST00000410868 191 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.25□□□□□ -1.73
SUMO3P55854 AC019097.1-201ENST00000424783 735 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 AL590762.4-201ENST00000425885 253 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 USP9YP9-201ENST00000429406 715 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 AL365440.1-201ENST00000436135 2167 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 AC006466.1-201ENST00000438721 289 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 AL121871.1-201ENST00000443413 436 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.25□□□□□ -1.73
SUMO3P55854 AC079448.1-201ENST00000449377 373 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.25□□□□□ -1.73
SUMO3P55854 MTCO3P20-201ENST00000454926 688 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.25□□□□□ -1.73
SUMO3P55854 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.25□□□□□ -1.73
SUMO3P55854 AC010493.1-201ENST00000513479 292 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 AL117351.2-201ENST00000513571 157 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 RN7SKP244-201ENST00000516513 307 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 RNU6-798P-201ENST00000516912 103 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SUMO3P55854 AP000857.1-201ENST00000532151 543 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.25□□□□□ -1.73
SUMO3P55854 AL133271.1-201ENST00000538229 291 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.25□□□□□ -1.73
SUMO3P55854 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.25□□□□□ -1.73
SUMO3P55854 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.25□□□□□ -1.73
SUMO3P55854 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.25□□□□□ -1.73
SUMO3P55854 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.25□□□□□ -1.73
SUMO3P55854 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.25□□□□□ -1.73
SUMO3P55854 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.25□□□□□ -1.73
SUMO3P55854 U4.5-201ENST00000617137 123 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 AC091953.3-201ENST00000623220 236 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 AC083843.3-201ENST00000623679 2186 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 SEPT14P19-203ENST00000633205 211 ntBASIC4.25□□□□□ -1.73
SUMO3P55854 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.25□□□□□ -1.73
SUMO3P55854 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.25□□□□□ -1.73
SUMO3P55854 AL592182.3-201ENST00000642132 3304 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SUMO3P55854 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SUMO3P55854 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SUMO3P55854 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
SUMO3P55854 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SUMO3P55854 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SUMO3P55854 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SUMO3P55854 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SUMO3P55854 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SUMO3P55854 MIR135A2-201ENST00000384854 100 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SUMO3P55854 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.24□□□□□ -1.73
SUMO3P55854 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.24□□□□□ -1.73
SUMO3P55854 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.24□□□□□ -1.73
SUMO3P55854 AC137499.1-201ENST00000427602 88 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 AL360081.1-201ENST00000428299 555 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 RPL31P35-201ENST00000431058 377 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 AL358934.1-201ENST00000432346 324 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.24□□□□□ -1.73
SUMO3P55854 AL359265.2-201ENST00000434367 631 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 AL772161.1-201ENST00000439130 476 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 RPL21P89-201ENST00000444021 467 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 AC007967.1-201ENST00000455422 1159 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.24□□□□□ -1.73
SUMO3P55854 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.24□□□□□ -1.73
SUMO3P55854 AC108751.2-201ENST00000469993 231 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 AC126182.1-201ENST00000478134 357 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 AC020893.1-201ENST00000502452 580 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 HMGB1P29-201ENST00000505659 499 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.24□□□□□ -1.73
SUMO3P55854 FTH1P21-201ENST00000512179 511 ntBASIC4.24□□□□□ -1.73
SUMO3P55854 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.24□□□□□ -1.73
SUMO3P55854 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.24□□□□□ -1.73
SUMO3P55854 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.24□□□□□ -1.73
SUMO3P55854 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.24□□□□□ -1.73
SUMO3P55854 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms