Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
FOXA3P55318 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.05□□□□□ -2.08
FOXA3P55318 RNA5SP479-201ENST00000364858 117 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 RNU1-138P-201ENST00000384093 164 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 SNORA48.5-201ENST00000391143 135 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 RPS7P15-201ENST00000415804 584 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 AL645937.1-202ENST00000421799 937 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 SUMO1P4-201ENST00000429430 302 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 AC097713.2-201ENST00000430199 356 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.05□□□□□ -2.08
FOXA3P55318 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.05□□□□□ -2.08
FOXA3P55318 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.05□□□□□ -2.08
FOXA3P55318 AC091153.1-201ENST00000466297 402 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 AP002812.1-201ENST00000495378 474 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.05□□□□□ -2.08
FOXA3P55318 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.05□□□□□ -2.08
FOXA3P55318 OR7K1P-201ENST00000546439 926 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
FOXA3P55318 AC106785.1-201ENST00000565935 262 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.05□□□□□ -2.08
FOXA3P55318 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.05□□□□□ -2.08
FOXA3P55318 AC010620.2-201ENST00000600135 313 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 AL009028.1-201ENST00000604895 802 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 AL356863.1-201ENST00000623378 1080 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 AL122126.1-201ENST00000546905 1318 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.05□□□□□ -2.08
FOXA3P55318 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
FOXA3P55318 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
FOXA3P55318 AL359893.1-201ENST00000447628 1580 ntBASIC2.05□□□□□ -2.08
FOXA3P55318 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
FOXA3P55318 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
FOXA3P55318 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
FOXA3P55318 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
FOXA3P55318 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.04□□□□□ -2.08
FOXA3P55318 ANAPC10P1-201ENST00000395991 556 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 MTATP6P31-201ENST00000406985 692 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 RNA5SP181-201ENST00000410246 98 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 AC092447.6-201ENST00000414578 210 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 ZNF734P-201ENST00000419494 1534 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 AL137014.1-201ENST00000420490 1226 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 AC005300.1-201ENST00000428401 373 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.04□□□□□ -2.08
FOXA3P55318 CR769767.1-201ENST00000436337 346 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 AC006028.1-201ENST00000438379 402 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.04□□□□□ -2.08
FOXA3P55318 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.04□□□□□ -2.08
FOXA3P55318 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
FOXA3P55318 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.04□□□□□ -2.08
FOXA3P55318 AC068587.1-201ENST00000483613 781 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 AC111193.1-201ENST00000504097 155 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
FOXA3P55318 MTND3P24-201ENST00000506306 329 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 AC004062.1-201ENST00000509926 645 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.04□□□□□ -2.08
FOXA3P55318 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.04□□□□□ -2.08
FOXA3P55318 AC091826.1-201ENST00000514065 313 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.04□□□□□ -2.08
FOXA3P55318 AC024341.1-201ENST00000526444 1552 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.04□□□□□ -2.08
FOXA3P55318 AP002404.1-201ENST00000532005 451 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 AL391156.1-201ENST00000554965 554 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 AC023158.1-201ENST00000561632 1025 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.04□□□□□ -2.08
FOXA3P55318 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.04□□□□□ -2.08
FOXA3P55318 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.04□□□□□ -2.08
FOXA3P55318 MIR4697-201ENST00000582977 78 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.04□□□□□ -2.08
FOXA3P55318 AL606834.2-201ENST00000602954 668 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 AC092474.3-201ENST00000603022 568 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 AL049779.4-201ENST00000604500 156 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 AC084036.1-201ENST00000609190 508 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 AL161734.1-201ENST00000609720 557 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 CYCSP41-201ENST00000616920 296 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 MIR6076-201ENST00000617521 113 ntBASIC2.04□□□□□ -2.08
FOXA3P55318 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.04□□□□□ -2.08
FOXA3P55318 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
FOXA3P55318 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
FOXA3P55318 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.03□□□□□ -2.08
FOXA3P55318 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
FOXA3P55318 SNORA63.1-201ENST00000362493 131 ntBASIC2.03□□□□□ -2.08
FOXA3P55318 SNORA71.1-201ENST00000364523 117 ntBASIC2.03□□□□□ -2.08
FOXA3P55318 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
FOXA3P55318 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.03□□□□□ -2.08
FOXA3P55318 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.03□□□□□ -2.08
FOXA3P55318 UBE2V1P1-201ENST00000430836 445 ntBASIC2.03□□□□□ -2.08
FOXA3P55318 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.03□□□□□ -2.08
FOXA3P55318 RPS12P2-201ENST00000439728 269 ntBASIC2.03□□□□□ -2.08
FOXA3P55318 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.03□□□□□ -2.08
FOXA3P55318 AL513321.1-201ENST00000441175 761 ntBASIC2.03□□□□□ -2.08
FOXA3P55318 HSFY3P-201ENST00000444242 1191 ntBASIC2.03□□□□□ -2.08
FOXA3P55318 AL627224.1-201ENST00000448334 444 ntBASIC2.03□□□□□ -2.08
FOXA3P55318 AL034418.1-201ENST00000448675 860 ntBASIC2.03□□□□□ -2.08
FOXA3P55318 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.03□□□□□ -2.08
FOXA3P55318 AL109741.2-201ENST00000455561 343 ntBASIC2.03□□□□□ -2.08
FOXA3P55318 RPL23AP31-201ENST00000456160 467 ntBASIC2.03□□□□□ -2.08
FOXA3P55318 RPS3AP43-201ENST00000479743 781 ntBASIC2.03□□□□□ -2.08
FOXA3P55318 RPS27P27-201ENST00000498779 255 ntBASIC2.03□□□□□ -2.08
FOXA3P55318 RPL37P25-201ENST00000507308 276 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms