Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.89□□□□□ -1.95
NUP98P52948 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NUP98P52948 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NUP98P52948 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
NUP98P52948 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.88□□□□□ -1.95
NUP98P52948 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
NUP98P52948 MIR124-3-201ENST00000384866 87 ntBASIC2.88□□□□□ -1.95
NUP98P52948 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
NUP98P52948 AL353093.1-201ENST00000441292 436 ntBASIC2.88□□□□□ -1.95
NUP98P52948 GAPDHP27-201ENST00000447427 1020 ntBASIC2.88□□□□□ -1.95
NUP98P52948 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.88□□□□□ -1.95
NUP98P52948 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.88□□□□□ -1.95
NUP98P52948 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.88□□□□□ -1.95
NUP98P52948 XKRY-201ENST00000510392 1100 ntBASIC2.88□□□□□ -1.95
NUP98P52948 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.88□□□□□ -1.95
NUP98P52948 RNU6-347P-201ENST00000516658 105 ntBASIC2.88□□□□□ -1.95
NUP98P52948 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.88□□□□□ -1.95
NUP98P52948 MIR5007-201ENST00000583098 95 ntBASIC2.88□□□□□ -1.95
NUP98P52948 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.88□□□□□ -1.95
NUP98P52948 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.88□□□□□ -1.95
NUP98P52948 AC019131.2-201ENST00000609071 870 ntBASIC2.88□□□□□ -1.95
NUP98P52948 AC009318.2-201ENST00000610917 651 ntBASIC2.88□□□□□ -1.95
NUP98P52948 AC002076.2-201ENST00000617362 122 ntBASIC2.88□□□□□ -1.95
NUP98P52948 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NUP98P52948 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.87□□□□□ -1.95
NUP98P52948 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.87□□□□□ -1.95
NUP98P52948 MUPP-201ENST00000438111 566 ntBASIC2.87□□□□□ -1.95
NUP98P52948 AC068305.1-201ENST00000497406 726 ntBASIC2.87□□□□□ -1.95
NUP98P52948 RPS27P27-201ENST00000498779 255 ntBASIC2.87□□□□□ -1.95
NUP98P52948 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.87□□□□□ -1.95
NUP98P52948 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.87□□□□□ -1.95
NUP98P52948 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.87□□□□□ -1.95
NUP98P52948 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.87□□□□□ -1.95
NUP98P52948 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.87□□□□□ -1.95
NUP98P52948 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.87□□□□□ -1.95
NUP98P52948 AC007620.3-201ENST00000608131 497 ntBASIC2.87□□□□□ -1.95
NUP98P52948 AL592494.3-201ENST00000609485 464 ntBASIC2.87□□□□□ -1.95
NUP98P52948 AC004925.1-201ENST00000624256 2706 ntBASIC2.87□□□□□ -1.95
NUP98P52948 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.87□□□□□ -1.95
NUP98P52948 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NUP98P52948 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.87□□□□□ -1.95
NUP98P52948 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NUP98P52948 MTND5P27-201ENST00000428871 1720 ntBASIC2.87□□□□□ -1.95
NUP98P52948 WASF1P1-201ENST00000447560 1131 ntBASIC2.86□□□□□ -1.95
NUP98P52948 AC069277.2-201ENST00000454211 432 ntBASIC2.86□□□□□ -1.95
NUP98P52948 RNU6-1218P-201ENST00000458990 108 ntBASIC2.86□□□□□ -1.95
NUP98P52948 AC008837.1-201ENST00000511513 412 ntBASIC2.86□□□□□ -1.95
NUP98P52948 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.86□□□□□ -1.95
NUP98P52948 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.86□□□□□ -1.95
NUP98P52948 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.86□□□□□ -1.95
NUP98P52948 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.86□□□□□ -1.95
NUP98P52948 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.86□□□□□ -1.95
NUP98P52948 NTAN1P1-201ENST00000603150 646 ntBASIC2.86□□□□□ -1.95
NUP98P52948 AC025754.2-201ENST00000606491 432 ntBASIC2.86□□□□□ -1.95
NUP98P52948 CR589904.2-201ENST00000612533 440 ntBASIC2.86□□□□□ -1.95
NUP98P52948 LRRC77P-213ENST00000637727 880 ntBASIC2.86□□□□□ -1.95
NUP98P52948 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
NUP98P52948 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.86□□□□□ -1.95
NUP98P52948 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NUP98P52948 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.86□□□□□ -1.95
NUP98P52948 RNU6-697P-201ENST00000363348 107 ntBASIC2.86□□□□□ -1.95
NUP98P52948 HMGB1P11-201ENST00000413899 637 ntBASIC2.86□□□□□ -1.95
NUP98P52948 AC093151.1-201ENST00000427711 313 ntBASIC2.86□□□□□ -1.95
NUP98P52948 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NUP98P52948 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.86□□□□□ -1.95
NUP98P52948 AL645939.1-201ENST00000453429 797 ntBASIC2.86□□□□□ -1.95
NUP98P52948 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.86□□□□□ -1.95
NUP98P52948 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.86□□□□□ -1.95
NUP98P52948 AC107222.1-201ENST00000510899 637 ntBASIC2.86□□□□□ -1.95
NUP98P52948 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.86□□□□□ -1.95
NUP98P52948 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
NUP98P52948 AC067747.1-201ENST00000608026 250 ntBASIC2.86□□□□□ -1.95
NUP98P52948 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.86□□□□□ -1.95
NUP98P52948 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.86□□□□□ -1.95
NUP98P52948 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.85□□□□□ -1.95
NUP98P52948 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NUP98P52948 GSTA9P-201ENST00000406231 611 ntBASIC2.85□□□□□ -1.95
NUP98P52948 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
NUP98P52948 AL139156.1-201ENST00000412785 841 ntBASIC2.85□□□□□ -1.95
NUP98P52948 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.85□□□□□ -1.95
NUP98P52948 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.85□□□□□ -1.95
NUP98P52948 RPL36AP6-201ENST00000435770 321 ntBASIC2.85□□□□□ -1.95
NUP98P52948 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.85□□□□□ -1.95
NUP98P52948 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.85□□□□□ -1.95
NUP98P52948 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.85□□□□□ -1.95
NUP98P52948 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NUP98P52948 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.85□□□□□ -1.95
NUP98P52948 AC107294.3-201ENST00000609211 526 ntBASIC2.85□□□□□ -1.95
NUP98P52948 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.85□□□□□ -1.95
NUP98P52948 NF1P10-201ENST00000613227 742 ntBASIC2.85□□□□□ -1.95
NUP98P52948 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
NUP98P52948 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NUP98P52948 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NUP98P52948 AC066616.2-201ENST00000559334 1481 ntBASIC2.84□□□□□ -1.95
NUP98P52948 FRG1BP-201ENST00000278882 761 ntBASIC2.84□□□□□ -1.95
NUP98P52948 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
NUP98P52948 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.84□□□□□ -1.95
NUP98P52948 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.84□□□□□ -1.95
NUP98P52948 GSTA11P-201ENST00000452866 669 ntBASIC2.84□□□□□ -1.95
NUP98P52948 AP000893.1-201ENST00000474462 794 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms