Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 AC006484.1-201ENST00000435086 1884 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF144AP50876 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
RNF144AP50876 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF144AP50876 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF144AP50876 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF144AP50876 HSPA8P4-201ENST00000511877 1920 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF144AP50876 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.7□□□□□ -1.5
RNF144AP50876 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RNF144AP50876 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF144AP50876 AC022164.1-201ENST00000568767 2673 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF144AP50876 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RNF144AP50876 Y_RNA.105-201ENST00000363182 111 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 Y_RNA.183-201ENST00000363882 113 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 RNU6-596P-201ENST00000365395 98 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 RNU6-1329P-201ENST00000365664 107 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 RNU6-611P-201ENST00000384276 104 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 Y_RNA.506-201ENST00000384494 102 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 SNRPEP6-201ENST00000407465 277 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 RNU6-1203P-201ENST00000410703 110 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 Y_RNA.793-201ENST00000411222 111 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF144AP50876 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF144AP50876 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF144AP50876 UBE2D3P2-201ENST00000424409 445 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF144AP50876 RPL12P17-201ENST00000432393 498 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 AC013403.1-201ENST00000436954 263 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 AC098831.1-201ENST00000440661 216 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RNF144AP50876 AC098869.1-201ENST00000481627 292 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 AC092349.1-201ENST00000504903 310 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF144AP50876 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF144AP50876 AC010343.2-201ENST00000510162 224 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF144AP50876 Y_RNA.689-201ENST00000516589 107 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 AC104576.1-201ENST00000524225 88 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 CBX3P8-201ENST00000532412 525 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF144AP50876 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF144AP50876 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF144AP50876 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF144AP50876 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF144AP50876 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF144AP50876 NPIPB1P-202ENST00000588786 828 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 AC020916.2-201ENST00000591242 360 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 AC005191.1-201ENST00000603950 358 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 FAM27E4-201ENST00000605259 342 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 AL161616.1-201ENST00000611867 286 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF144AP50876 AL137067.2-201ENST00000621202 131 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF144AP50876 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF144AP50876 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.7□□□□□ -1.5
RNF144AP50876 DDX18P3-201ENST00000404856 2007 ntBASIC5.7□□□□□ -1.5
RNF144AP50876 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF144AP50876 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF144AP50876 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF144AP50876 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF144AP50876 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF144AP50876 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF144AP50876 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF144AP50876 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF144AP50876 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RNF144AP50876 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF144AP50876 AL137003.2-201ENST00000606924 2538 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 OR52B3P-201ENST00000314715 928 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 MIR335-201ENST00000362173 94 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 RNA5SP110-201ENST00000362638 115 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 RN7SKP95-201ENST00000362860 303 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 Y_RNA.84-201ENST00000363011 104 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 Y_RNA.200-201ENST00000364018 102 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 Y_RNA.237-201ENST00000364439 102 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 RNU6-790P-201ENST00000384479 105 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 RN7SKP151-201ENST00000410230 316 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 RNU2-33P-201ENST00000410344 192 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF144AP50876 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF144AP50876 AC096920.1-201ENST00000423991 241 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF144AP50876 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF144AP50876 CEACAMP6-201ENST00000452007 574 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF144AP50876 RN7SL552P-201ENST00000462094 276 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.69□□□□□ -1.5
RNF144AP50876 SNORA70.11-201ENST00000515987 138 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 SNORA70.13-201ENST00000516116 138 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 RNU6-1212P-201ENST00000517023 104 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF144AP50876 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.69□□□□□ -1.5
RNF144AP50876 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF144AP50876 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF144AP50876 AC012119.1-201ENST00000603184 222 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 AP001823.1-201ENST00000604056 1003 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 AC002044.1-201ENST00000606707 158 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms