Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.48□□□□□ -1.85
TNFRSF4P43489 AC095050.2-201ENST00000510748 1458 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 OTUD4P1-201ENST00000237841 3067 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TNFRSF4P43489 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.48□□□□□ -1.85
TNFRSF4P43489 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TNFRSF4P43489 RNU6-600P-201ENST00000362524 99 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 Y_RNA.25-201ENST00000362528 102 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 RNU6-989P-201ENST00000362756 107 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 snoZ40.1-201ENST00000364540 72 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 SNORA51.2-201ENST00000364595 132 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 RNU6-821P-201ENST00000390995 107 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 HMGN2P8-201ENST00000391458 268 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.48□□□□□ -1.85
TNFRSF4P43489 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.48□□□□□ -1.85
TNFRSF4P43489 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFRSF4P43489 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.48□□□□□ -1.85
TNFRSF4P43489 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFRSF4P43489 NANOGP6-201ENST00000429190 847 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 MOB1AP1-201ENST00000430903 535 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFRSF4P43489 RPS29P31-201ENST00000446147 164 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 AC112492.1-201ENST00000449607 712 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.48□□□□□ -1.85
TNFRSF4P43489 HMGB3P22-202ENST00000451823 572 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 RPS20P24-201ENST00000457473 361 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 RPL9P32-201ENST00000464118 620 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 TMED11P-201ENST00000479478 690 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFRSF4P43489 RPL21P131-201ENST00000497298 483 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 AC110794.1-201ENST00000505816 425 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 BTF3L4P4-201ENST00000506381 449 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.48□□□□□ -1.85
TNFRSF4P43489 RNU6-1261P-201ENST00000517194 104 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 AC087808.1-201ENST00000520501 361 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TNFRSF4P43489 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TNFRSF4P43489 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TNFRSF4P43489 MIR4276-201ENST00000584832 70 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 MTCO2P2-201ENST00000591258 225 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 AL606834.2-201ENST00000602954 668 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 AC008638.3-201ENST00000603341 463 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 AC124312.4-201ENST00000605533 310 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 AL157392.4-201ENST00000609756 345 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 AC006329.2-201ENST00000611491 394 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 AC005332.6-201ENST00000613178 446 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 CYCSP41-201ENST00000616920 296 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 MIR4278-201ENST00000636094 69 ntBASIC3.48□□□□□ -1.85
TNFRSF4P43489 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.48□□□□□ -1.85
TNFRSF4P43489 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.48□□□□□ -1.85
TNFRSF4P43489 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.48□□□□□ -1.85
TNFRSF4P43489 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TNFRSF4P43489 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TNFRSF4P43489 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 AC008725.1-201ENST00000605123 2263 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TNFRSF4P43489 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 RNU6-1181P-201ENST00000384191 106 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 AL121834.1-202ENST00000404494 277 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 RNU2-37P-201ENST00000410695 177 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 AC096664.2-201ENST00000411843 406 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 AL160275.2-201ENST00000412010 394 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 LUZP4P1-201ENST00000415420 344 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 AIMP1P1-201ENST00000418670 937 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 GTF2IP23-201ENST00000423746 351 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 AL512649.1-201ENST00000428997 581 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 AL009048.1-201ENST00000450437 298 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 AC092757.1-201ENST00000467293 467 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 AC084357.1-201ENST00000473404 255 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 TRAV31-201ENST00000502780 342 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 AC113347.3-201ENST00000509113 148 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 PHBP14-201ENST00000512887 367 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TNFRSF4P43489 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TNFRSF4P43489 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 DUXAP6-201ENST00000553858 601 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 AC012182.1-201ENST00000570133 895 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 CKS1BP3-201ENST00000600888 237 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 AC103881.1-201ENST00000603476 538 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 AC078899.5-201ENST00000612475 178 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 AC009237.17-201ENST00000618111 748 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 AC092184.1-201ENST00000625042 715 ntBASIC3.47□□□□□ -1.85
TNFRSF4P43489 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFRSF4P43489 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms