Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXD13P35453 RN7SKP265-201ENST00000516448 223 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 RN7SKP83-201ENST00000516512 178 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXD13P35453 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD13P35453 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD13P35453 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD13P35453 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXD13P35453 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD13P35453 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD13P35453 MIR4644-201ENST00000579929 84 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXD13P35453 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD13P35453 AC025588.2-201ENST00000604851 466 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 AL158042.1-201ENST00000605338 460 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 AL451086.1-201ENST00000605596 223 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 AL121772.2-201ENST00000614331 297 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 AC119674.1-207ENST00000641355 633 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD13P35453 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD13P35453 MTND5P24-201ENST00000438892 1767 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD13P35453 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXD13P35453 CR381670.1-201ENST00000624291 1693 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 GABPAP-201ENST00000419271 1356 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD13P35453 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD13P35453 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXD13P35453 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD13P35453 MIR423-201ENST00000362201 94 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 RNU4-28P-201ENST00000364739 141 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 RNA5SP51-201ENST00000364750 119 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 RPL23AP29-201ENST00000397284 453 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD13P35453 AC092447.6-201ENST00000414578 210 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 AC017079.2-201ENST00000416102 485 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 AC245052.5-201ENST00000416320 649 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 RPS24P7-201ENST00000416921 246 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 AC245054.1-201ENST00000420944 258 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 HMGB1P12-201ENST00000438594 598 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 FGF7P5-201ENST00000441829 291 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 AL121871.1-201ENST00000443413 436 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 NOTCH2P1-201ENST00000443481 624 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD13P35453 HMGB1P15-201ENST00000453854 435 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 USP9YP10-201ENST00000454868 628 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 ANKRD26P4-201ENST00000455755 950 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD13P35453 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXD13P35453 AL024509.2-201ENST00000493462 493 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD13P35453 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD13P35453 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD13P35453 USP9YP5-201ENST00000511770 630 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD13P35453 MTCO2P32-201ENST00000514865 403 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXD13P35453 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXD13P35453 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.03□□□□□ -1.76
HOXD13P35453 SETP7-201ENST00000552169 453 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD13P35453 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD13P35453 AC090615.1-201ENST00000577519 154 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD13P35453 MIR3690-201ENST00000580266 75 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD13P35453 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD13P35453 AL357080.1-201ENST00000617394 239 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 AP000484.1-201ENST00000620067 1252 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 AL356585.4-201ENST00000623078 1229 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD13P35453 AC007656.2-201ENST00000624902 4547 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 OR4G11P-202ENST00000642116 1414 ntBASIC4.03□□□□□ -1.76
HOXD13P35453 AC006504.1-201ENST00000562493 3666 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD13P35453 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD13P35453 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD13P35453 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD13P35453 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD13P35453 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
HOXD13P35453 RNU6-28P-201ENST00000362378 107 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 RNA5SP42-201ENST00000364278 115 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 DHFRP6-201ENST00000401776 268 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 CYCSP45-201ENST00000402289 315 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 MTHFD2P2-201ENST00000407725 247 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXD13P35453 TPMTP2-201ENST00000414372 726 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 MTCYBP38-201ENST00000417160 1123 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 HMGB3P20-201ENST00000417997 600 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 AL953862.1-201ENST00000423016 168 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 EZH2P1-201ENST00000431167 291 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXD13P35453 SNRPEP7-201ENST00000438350 220 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 SDCBPP1-201ENST00000440192 890 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 RPL21P133-201ENST00000443666 476 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXD13P35453 AC239367.2-201ENST00000447309 705 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 BTF3P5-201ENST00000457252 467 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms