Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC025016.1-201ENST00000616746 682 ntBASIC2.87□□□□□ -1.95
RPA3P35244 STMN1P1-201ENST00000617809 440 ntBASIC2.87□□□□□ -1.95
RPA3P35244 AC090617.9-201ENST00000623751 147 ntBASIC2.87□□□□□ -1.95
RPA3P35244 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
RPA3P35244 AL356118.1-201ENST00000635272 1078 ntBASIC2.87□□□□□ -1.95
RPA3P35244 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
RPA3P35244 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RPA3P35244 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RPA3P35244 RNU1-140P-201ENST00000365040 165 ntBASIC2.86□□□□□ -1.95
RPA3P35244 DEFB109C-201ENST00000382575 264 ntBASIC2.86□□□□□ -1.95
RPA3P35244 DEFB109B-201ENST00000382656 264 ntBASIC2.86□□□□□ -1.95
RPA3P35244 Y_RNA.493-201ENST00000384422 102 ntBASIC2.86□□□□□ -1.95
RPA3P35244 SNORA48.5-201ENST00000391143 135 ntBASIC2.86□□□□□ -1.95
RPA3P35244 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.86□□□□□ -1.95
RPA3P35244 AC092745.2-202ENST00000411880 369 ntBASIC2.86□□□□□ -1.95
RPA3P35244 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.86□□□□□ -1.95
RPA3P35244 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.86□□□□□ -1.95
RPA3P35244 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.86□□□□□ -1.95
RPA3P35244 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.86□□□□□ -1.95
RPA3P35244 AC140076.1-201ENST00000449897 361 ntBASIC2.86□□□□□ -1.95
RPA3P35244 NPM1P13-201ENST00000452663 865 ntBASIC2.86□□□□□ -1.95
RPA3P35244 RPS24P6-201ENST00000452670 400 ntBASIC2.86□□□□□ -1.95
RPA3P35244 snoU13.24-201ENST00000458998 104 ntBASIC2.86□□□□□ -1.95
RPA3P35244 snoU13.3-201ENST00000459441 104 ntBASIC2.86□□□□□ -1.95
RPA3P35244 RPL7P5-201ENST00000471472 736 ntBASIC2.86□□□□□ -1.95
RPA3P35244 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RPA3P35244 MTCO3P35-201ENST00000485582 781 ntBASIC2.86□□□□□ -1.95
RPA3P35244 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.86□□□□□ -1.95
RPA3P35244 SCGB1D5P-201ENST00000515134 247 ntBASIC2.86□□□□□ -1.95
RPA3P35244 AL133271.1-201ENST00000538229 291 ntBASIC2.86□□□□□ -1.95
RPA3P35244 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.86□□□□□ -1.95
RPA3P35244 AL121603.1-201ENST00000553815 142 ntBASIC2.86□□□□□ -1.95
RPA3P35244 AL163153.1-201ENST00000554223 283 ntBASIC2.86□□□□□ -1.95
RPA3P35244 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.86□□□□□ -1.95
RPA3P35244 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.86□□□□□ -1.95
RPA3P35244 AC005046.1-201ENST00000608515 625 ntBASIC2.86□□□□□ -1.95
RPA3P35244 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.86□□□□□ -1.95
RPA3P35244 CYCSP41-201ENST00000616920 296 ntBASIC2.86□□□□□ -1.95
RPA3P35244 AC002076.2-201ENST00000617362 122 ntBASIC2.86□□□□□ -1.95
RPA3P35244 AC022509.4-201ENST00000621404 572 ntBASIC2.86□□□□□ -1.95
RPA3P35244 AC024595.1-201ENST00000623088 387 ntBASIC2.86□□□□□ -1.95
RPA3P35244 AC083865.1-201ENST00000636634 831 ntBASIC2.86□□□□□ -1.95
RPA3P35244 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
RPA3P35244 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.86□□□□□ -1.95
RPA3P35244 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.86□□□□□ -1.95
RPA3P35244 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
RPA3P35244 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.86□□□□□ -1.95
RPA3P35244 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.85□□□□□ -1.95
RPA3P35244 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
RPA3P35244 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RPA3P35244 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
RPA3P35244 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
RPA3P35244 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
RPA3P35244 RNU6-252P-201ENST00000363232 107 ntBASIC2.85□□□□□ -1.95
RPA3P35244 SNORA9.2-201ENST00000365361 133 ntBASIC2.85□□□□□ -1.95
RPA3P35244 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.85□□□□□ -1.95
RPA3P35244 SNORA9-201ENST00000384215 133 ntBASIC2.85□□□□□ -1.95
RPA3P35244 SNORA48.8-201ENST00000391324 134 ntBASIC2.85□□□□□ -1.95
RPA3P35244 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.85□□□□□ -1.95
RPA3P35244 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.85□□□□□ -1.95
RPA3P35244 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.85□□□□□ -1.95
RPA3P35244 RPL35AP12-201ENST00000425362 338 ntBASIC2.85□□□□□ -1.95
RPA3P35244 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.85□□□□□ -1.95
RPA3P35244 ZNF965P-201ENST00000432501 817 ntBASIC2.85□□□□□ -1.95
RPA3P35244 RPL23AP83-201ENST00000434984 473 ntBASIC2.85□□□□□ -1.95
RPA3P35244 COX6CP2-201ENST00000444980 225 ntBASIC2.85□□□□□ -1.95
RPA3P35244 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.85□□□□□ -1.95
RPA3P35244 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.85□□□□□ -1.95
RPA3P35244 AC003982.1-202ENST00000469928 248 ntBASIC2.85□□□□□ -1.95
RPA3P35244 RPS27AP9-201ENST00000477681 438 ntBASIC2.85□□□□□ -1.95
RPA3P35244 AC015724.1-201ENST00000478577 156 ntBASIC2.85□□□□□ -1.95
RPA3P35244 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.85□□□□□ -1.95
RPA3P35244 SNORA31.20-201ENST00000517111 133 ntBASIC2.85□□□□□ -1.95
RPA3P35244 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.85□□□□□ -1.95
RPA3P35244 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.85□□□□□ -1.95
RPA3P35244 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.85□□□□□ -1.95
RPA3P35244 MTCO3P24-201ENST00000572729 782 ntBASIC2.85□□□□□ -1.95
RPA3P35244 MIR4474-201ENST00000579189 78 ntBASIC2.85□□□□□ -1.95
RPA3P35244 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.85□□□□□ -1.95
RPA3P35244 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.85□□□□□ -1.95
RPA3P35244 AC004775.1-201ENST00000607389 753 ntBASIC2.85□□□□□ -1.95
RPA3P35244 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.85□□□□□ -1.95
RPA3P35244 AP001002.2-201ENST00000625137 386 ntBASIC2.85□□□□□ -1.95
RPA3P35244 AC017104.5-201ENST00000637647 639 ntBASIC2.85□□□□□ -1.95
RPA3P35244 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.85□□□□□ -1.95
RPA3P35244 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.85□□□□□ -1.95
RPA3P35244 AC073055.1-201ENST00000456901 1621 ntBASIC2.85□□□□□ -1.95
RPA3P35244 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.85□□□□□ -1.95
RPA3P35244 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RPA3P35244 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
RPA3P35244 FAM35BP-202ENST00000497389 3337 ntBASIC2.85□□□□□ -1.95
RPA3P35244 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.84□□□□□ -1.95
RPA3P35244 AC092593.1-201ENST00000515413 1815 ntBASIC2.84□□□□□ -1.95
RPA3P35244 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.84□□□□□ -1.95
RPA3P35244 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.84□□□□□ -1.95
RPA3P35244 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RPA3P35244 GNG5P1-201ENST00000255500 204 ntBASIC2.84□□□□□ -1.95
RPA3P35244 ENSAP3-201ENST00000312710 333 ntBASIC2.84□□□□□ -1.95
RPA3P35244 SNORD115-48-201ENST00000364764 76 ntBASIC2.84□□□□□ -1.95
RPA3P35244 SNORA51.12-201ENST00000384448 134 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms