Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA13P31271 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA13P31271 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA13P31271 RNA5SP239-201ENST00000410218 129 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 AC017079.2-201ENST00000416102 485 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 RPL7P53-201ENST00000421245 739 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA13P31271 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA13P31271 AC092641.1-201ENST00000440229 772 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA13P31271 RPL26P28-201ENST00000451325 435 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 SNORD108-201ENST00000459332 71 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 AP000926.1-201ENST00000479573 241 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 ACTG1P13-201ENST00000486987 1043 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 AP000563.1-201ENST00000490865 758 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXA13P31271 AC021146.8-201ENST00000507455 733 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA13P31271 OR5AK1P-201ENST00000524837 922 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 OR4R3P-201ENST00000525084 838 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.07□□□□□ -1.76
HOXA13P31271 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA13P31271 AL133457.1-201ENST00000564251 987 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 AC145350.1-201ENST00000567426 208 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA13P31271 AL354943.1-201ENST00000572103 781 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 MIR3944-201ENST00000581277 108 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA13P31271 NIFKP6-201ENST00000598115 845 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 SRGNP1-201ENST00000603392 451 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 AL031281.1-201ENST00000604049 488 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA13P31271 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA13P31271 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXA13P31271 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXA13P31271 U6.101-201ENST00000637707 76 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA13P31271 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXA13P31271 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXA13P31271 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXA13P31271 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXA13P31271 AL359893.1-201ENST00000447628 1580 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 MTCO1P24-201ENST00000515438 1558 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXA13P31271 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXA13P31271 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXA13P31271 GDI2P1-201ENST00000429312 1336 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 OR11H5P-202ENST00000641612 1325 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 RNU6-263P-201ENST00000363811 107 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 RNU4-40P-201ENST00000364351 143 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 HMGN2P8-201ENST00000391458 268 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXA13P31271 AL603766.1-201ENST00000407763 664 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 RNU4-78P-201ENST00000410940 126 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXA13P31271 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXA13P31271 BX842559.1-201ENST00000419615 532 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXA13P31271 RPS25P9-201ENST00000435591 252 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 AC127537.2-201ENST00000439258 465 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 MTND2P22-201ENST00000444325 1033 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXA13P31271 RPS4XP10-201ENST00000465034 731 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 AC108078.3-201ENST00000502633 489 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXA13P31271 AC093281.2-201ENST00000510153 597 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 XKRY-201ENST00000510392 1100 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 MTCO3P44-201ENST00000510977 541 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXA13P31271 RNU6-583P-201ENST00000516012 92 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXA13P31271 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXA13P31271 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXA13P31271 AL139174.1-201ENST00000531489 886 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXA13P31271 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.06□□□□□ -1.76
HOXA13P31271 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXA13P31271 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXA13P31271 LARP7P2-201ENST00000575306 125 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXA13P31271 MAGOH2P-202ENST00000584384 429 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXA13P31271 VN1R82P-201ENST00000601481 356 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 AC006539.2-201ENST00000601729 572 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 AC078899.5-201ENST00000612475 178 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXA13P31271 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 AC073968.1-201ENST00000618594 637 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXA13P31271 AC017037.3-201ENST00000625016 472 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 MIR1322-201ENST00000638013 71 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXA13P31271 OTUD4P1-201ENST00000237841 3067 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HOXA13P31271 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXA13P31271 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXA13P31271 PRO1804-201ENST00000623780 2050 ntBASIC4.06□□□□□ -1.76
HOXA13P31271 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HOXA13P31271 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms