Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RPS3AP37-201ENST00000419176 745 ntBASIC4.16□□□□□ -1.74
BDNFP23560 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.16□□□□□ -1.74
BDNFP23560 MOB1AP1-201ENST00000430903 535 ntBASIC4.16□□□□□ -1.74
BDNFP23560 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.16□□□□□ -1.74
BDNFP23560 VN1R25P-201ENST00000443385 738 ntBASIC4.16□□□□□ -1.74
BDNFP23560 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.16□□□□□ -1.74
BDNFP23560 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.16□□□□□ -1.74
BDNFP23560 VN1R40P-201ENST00000455196 941 ntBASIC4.16□□□□□ -1.74
BDNFP23560 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.16□□□□□ -1.74
BDNFP23560 AC097493.1-201ENST00000463958 372 ntBASIC4.16□□□□□ -1.74
BDNFP23560 MTND1P16-201ENST00000465177 898 ntBASIC4.16□□□□□ -1.74
BDNFP23560 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.16□□□□□ -1.74
BDNFP23560 RPL30P14-201ENST00000482744 348 ntBASIC4.16□□□□□ -1.74
BDNFP23560 RPL7P38-201ENST00000488396 739 ntBASIC4.16□□□□□ -1.74
BDNFP23560 RPL7P23-201ENST00000493874 747 ntBASIC4.16□□□□□ -1.74
BDNFP23560 RN7SL323P-201ENST00000494712 295 ntBASIC4.16□□□□□ -1.74
BDNFP23560 SNORA31.1-201ENST00000515993 133 ntBASIC4.16□□□□□ -1.74
BDNFP23560 SNORA31.5-201ENST00000516190 133 ntBASIC4.16□□□□□ -1.74
BDNFP23560 MIR2114-201ENST00000516645 80 ntBASIC4.16□□□□□ -1.74
BDNFP23560 RNU6-352P-201ENST00000516908 107 ntBASIC4.16□□□□□ -1.74
BDNFP23560 AC023632.4-201ENST00000517783 191 ntBASIC4.16□□□□□ -1.74
BDNFP23560 OR10V3P-201ENST00000525712 725 ntBASIC4.16□□□□□ -1.74
BDNFP23560 OR5M7P-201ENST00000526140 972 ntBASIC4.16□□□□□ -1.74
BDNFP23560 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.16□□□□□ -1.74
BDNFP23560 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.16□□□□□ -1.74
BDNFP23560 AL512347.1-201ENST00000566420 503 ntBASIC4.16□□□□□ -1.74
BDNFP23560 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.16□□□□□ -1.74
BDNFP23560 CCDC58P3-201ENST00000590792 430 ntBASIC4.16□□□□□ -1.74
BDNFP23560 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.16□□□□□ -1.74
BDNFP23560 AL139089.1-201ENST00000620372 975 ntBASIC4.16□□□□□ -1.74
BDNFP23560 AC009269.6-201ENST00000621778 588 ntBASIC4.16□□□□□ -1.74
BDNFP23560 FP236240.3-201ENST00000623061 327 ntBASIC4.16□□□□□ -1.74
BDNFP23560 AL356863.1-201ENST00000623378 1080 ntBASIC4.16□□□□□ -1.74
BDNFP23560 AC073530.2-201ENST00000623987 261 ntBASIC4.16□□□□□ -1.74
BDNFP23560 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.16□□□□□ -1.74
BDNFP23560 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.16□□□□□ -1.74
BDNFP23560 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
BDNFP23560 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.15□□□□□ -1.74
BDNFP23560 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
BDNFP23560 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
BDNFP23560 AC005832.2-201ENST00000538921 1430 ntBASIC4.15□□□□□ -1.74
BDNFP23560 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
BDNFP23560 RNA5SP97-201ENST00000365006 84 ntBASIC4.15□□□□□ -1.75
BDNFP23560 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.15□□□□□ -1.75
BDNFP23560 MIR30B-201ENST00000384850 88 ntBASIC4.15□□□□□ -1.75
BDNFP23560 SKINT1L-201ENST00000401057 817 ntBASIC4.15□□□□□ -1.75
BDNFP23560 RNA5SP80-201ENST00000410475 111 ntBASIC4.15□□□□□ -1.75
BDNFP23560 RN7SKP159-201ENST00000410657 292 ntBASIC4.15□□□□□ -1.75
BDNFP23560 AC068533.2-201ENST00000411872 306 ntBASIC4.15□□□□□ -1.75
BDNFP23560 AL592310.1-201ENST00000414330 671 ntBASIC4.15□□□□□ -1.75
BDNFP23560 UBE2D3P2-201ENST00000424409 445 ntBASIC4.15□□□□□ -1.75
BDNFP23560 MTATP6P4-201ENST00000427725 675 ntBASIC4.15□□□□□ -1.75
BDNFP23560 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.15□□□□□ -1.75
BDNFP23560 RPL23AP76-201ENST00000441860 458 ntBASIC4.15□□□□□ -1.75
BDNFP23560 RANP8-201ENST00000444720 713 ntBASIC4.15□□□□□ -1.75
BDNFP23560 AL590664.1-201ENST00000448065 339 ntBASIC4.15□□□□□ -1.75
BDNFP23560 RPL32P34-201ENST00000486380 400 ntBASIC4.15□□□□□ -1.75
BDNFP23560 MTND3P3-201ENST00000505004 126 ntBASIC4.15□□□□□ -1.75
BDNFP23560 CBX3P3-201ENST00000508108 532 ntBASIC4.15□□□□□ -1.75
BDNFP23560 RNU1-45P-201ENST00000517191 141 ntBASIC4.15□□□□□ -1.75
BDNFP23560 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
BDNFP23560 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.15□□□□□ -1.75
BDNFP23560 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.15□□□□□ -1.75
BDNFP23560 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.15□□□□□ -1.75
BDNFP23560 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.15□□□□□ -1.75
BDNFP23560 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.15□□□□□ -1.75
BDNFP23560 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.15□□□□□ -1.75
BDNFP23560 AL139022.2-201ENST00000606934 443 ntBASIC4.15□□□□□ -1.75
BDNFP23560 AL121652.1-201ENST00000608851 448 ntBASIC4.15□□□□□ -1.75
BDNFP23560 AC022306.3-201ENST00000619930 550 ntBASIC4.15□□□□□ -1.75
BDNFP23560 AC092628.2-201ENST00000622492 339 ntBASIC4.15□□□□□ -1.75
BDNFP23560 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.15□□□□□ -1.75
BDNFP23560 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.15□□□□□ -1.75
BDNFP23560 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
BDNFP23560 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.15□□□□□ -1.75
BDNFP23560 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.15□□□□□ -1.75
BDNFP23560 AC008568.2-201ENST00000623862 2313 ntBASIC4.15□□□□□ -1.75
BDNFP23560 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
BDNFP23560 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.14□□□□□ -1.75
BDNFP23560 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.14□□□□□ -1.75
BDNFP23560 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.14□□□□□ -1.75
BDNFP23560 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
BDNFP23560 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
BDNFP23560 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BDNFP23560 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
BDNFP23560 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
BDNFP23560 RNU6-925P-201ENST00000384629 104 ntBASIC4.14□□□□□ -1.75
BDNFP23560 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BDNFP23560 AL354692.1-201ENST00000423044 315 ntBASIC4.14□□□□□ -1.75
BDNFP23560 USP9YP36-201ENST00000424581 829 ntBASIC4.14□□□□□ -1.75
BDNFP23560 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.14□□□□□ -1.75
BDNFP23560 AC024082.2-201ENST00000434771 238 ntBASIC4.14□□□□□ -1.75
BDNFP23560 AC083863.1-201ENST00000438811 231 ntBASIC4.14□□□□□ -1.75
BDNFP23560 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.14□□□□□ -1.75
BDNFP23560 RPL21P8-201ENST00000465083 535 ntBASIC4.14□□□□□ -1.75
BDNFP23560 RN7SL542P-201ENST00000467147 294 ntBASIC4.14□□□□□ -1.75
BDNFP23560 AC025445.1-201ENST00000502728 300 ntBASIC4.14□□□□□ -1.75
BDNFP23560 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.14□□□□□ -1.75
BDNFP23560 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.14□□□□□ -1.75
BDNFP23560 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms