Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RN7SKP104-201ENST00000362605 328 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 RNY4P16-201ENST00000364768 94 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TNFSF4P23510 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
TNFSF4P23510 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.15□□□□□ -1.75
TNFSF4P23510 AC019097.1-201ENST00000424783 735 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFSF4P23510 AC137499.1-201ENST00000427602 88 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFSF4P23510 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFSF4P23510 AC119618.1-201ENST00000434191 222 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 AL451139.1-201ENST00000434718 346 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFSF4P23510 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.15□□□□□ -1.75
TNFSF4P23510 CBX1P1-201ENST00000440184 427 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFSF4P23510 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.15□□□□□ -1.75
TNFSF4P23510 AC091685.2-201ENST00000454924 864 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFSF4P23510 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.15□□□□□ -1.75
TNFSF4P23510 TPT1P7-201ENST00000458300 517 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 VN1R17P-201ENST00000472048 1090 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFSF4P23510 AC093270.2-201ENST00000486157 792 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 NIPA2P2-201ENST00000496376 1083 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFSF4P23510 BTF3P13-201ENST00000513224 490 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.15□□□□□ -1.75
TNFSF4P23510 ERHP1-201ENST00000523006 310 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 AC021006.3-201ENST00000530771 192 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.15□□□□□ -1.75
TNFSF4P23510 AC135001.1-201ENST00000544546 283 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.15□□□□□ -1.75
TNFSF4P23510 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TNFSF4P23510 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFSF4P23510 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFSF4P23510 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFSF4P23510 AC007687.1-201ENST00000602704 304 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 AC020910.3-201ENST00000603701 874 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 AC087283.1-201ENST00000604029 1074 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 AL451064.1-201ENST00000607718 471 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 TUG1_2.1-201ENST00000614234 87 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
TNFSF4P23510 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.15□□□□□ -1.75
TNFSF4P23510 AC024560.2-201ENST00000507981 1497 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TNFSF4P23510 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TNFSF4P23510 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
TNFSF4P23510 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TNFSF4P23510 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.15□□□□□ -1.75
TNFSF4P23510 AC139769.1-204ENST00000472297 1931 ntBASIC4.15□□□□□ -1.75
TNFSF4P23510 AC108467.2-201ENST00000617640 1597 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 AC100778.3-201ENST00000580060 1750 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.14□□□□□ -1.75
TNFSF4P23510 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.14□□□□□ -1.75
TNFSF4P23510 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TNFSF4P23510 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TNFSF4P23510 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
TNFSF4P23510 RNU4-75P-201ENST00000364621 146 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 AC016769.2-201ENST00000414815 475 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 UBE2FP1-201ENST00000416536 447 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.14□□□□□ -1.75
TNFSF4P23510 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.14□□□□□ -1.75
TNFSF4P23510 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.14□□□□□ -1.75
TNFSF4P23510 NMNAT1P2-201ENST00000435192 860 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 ARPC3P1-201ENST00000437218 533 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 AL138878.2-201ENST00000440581 1241 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.14□□□□□ -1.75
TNFSF4P23510 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TNFSF4P23510 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.14□□□□□ -1.75
TNFSF4P23510 RPS3AP41-201ENST00000462701 778 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 AC108860.1-201ENST00000484521 383 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 AC083982.1-201ENST00000485679 344 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 RPS15AP36-201ENST00000492022 382 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TNFSF4P23510 AC010587.1-201ENST00000505809 469 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.14□□□□□ -1.75
TNFSF4P23510 CDC42P4-201ENST00000510507 563 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.14□□□□□ -1.75
TNFSF4P23510 FTH1P9-201ENST00000513251 355 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 RNU1-6P-201ENST00000516290 144 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 SNORA31.8-201ENST00000516327 108 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 RNA5SP309-201ENST00000516670 106 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 IGKV2D-23-201ENST00000518179 286 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 RPL23AP53-201ENST00000521854 457 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 CCNG2P1-201ENST00000549521 1000 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 MIR3667-201ENST00000581025 74 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 MIR4436B2-201ENST00000581415 91 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 MIR4436B1-201ENST00000583272 91 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.14□□□□□ -1.75
TNFSF4P23510 AC091805.2-201ENST00000603848 235 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 AL049634.3-201ENST00000604968 457 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 AL121932.1-201ENST00000605542 214 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 AC024941.1-201ENST00000612250 334 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 AC008498.1-201ENST00000613012 531 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TNFSF4P23510 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TNFSF4P23510 AC116667.1-201ENST00000604855 2072 ntBASIC4.14□□□□□ -1.75
TNFSF4P23510 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms