Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SNORD46.2-201ENST00000516021 102 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 Y_RNA.721-201ENST00000517207 102 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NFKB1P19838 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.66□□□□□ -1.5
NFKB1P19838 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.66□□□□□ -1.5
NFKB1P19838 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.66□□□□□ -1.5
NFKB1P19838 AL049779.2-201ENST00000553847 315 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 IGBP1P1-201ENST00000554337 1009 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.66□□□□□ -1.5
NFKB1P19838 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 RNA5SP439-201ENST00000617595 124 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.66□□□□□ -1.5
NFKB1P19838 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.66□□□□□ -1.5
NFKB1P19838 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
NFKB1P19838 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.66□□□□□ -1.5
NFKB1P19838 AC109780.1-201ENST00000451768 1344 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 OR13C1P-202ENST00000641378 2919 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.66□□□□□ -1.5
NFKB1P19838 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.66□□□□□ -1.5
NFKB1P19838 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.66□□□□□ -1.5
NFKB1P19838 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NFKB1P19838 AC011755.1-201ENST00000623763 2049 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NFKB1P19838 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
NFKB1P19838 AL360270.2-201ENST00000562952 5985 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NFKB1P19838 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NFKB1P19838 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NFKB1P19838 RNU6-188P-201ENST00000364207 107 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 RN7SKP292-201ENST00000365522 317 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.65□□□□□ -1.5
NFKB1P19838 Y_RNA.404-201ENST00000383978 102 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 RNU6-1127P-201ENST00000384580 107 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 MIR92A2-201ENST00000385299 75 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NFKB1P19838 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.65□□□□□ -1.5
NFKB1P19838 RNU6-387P-201ENST00000411331 105 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.65□□□□□ -1.5
NFKB1P19838 AL133482.1-201ENST00000415988 498 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 E2F6P2-201ENST00000420708 748 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.65□□□□□ -1.5
NFKB1P19838 AC007161.1-204ENST00000423039 460 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 EZH2P1-201ENST00000431167 291 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NFKB1P19838 EEF1B2P6-201ENST00000445713 673 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 NOP56P2-201ENST00000447491 769 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.65□□□□□ -1.5
NFKB1P19838 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.65□□□□□ -1.5
NFKB1P19838 RN7SL197P-201ENST00000466981 299 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 RNU6-470P-201ENST00000515954 104 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 RNU6-798P-201ENST00000516912 103 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 RN7SKP40-201ENST00000517211 242 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.65□□□□□ -1.5
NFKB1P19838 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
NFKB1P19838 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.65□□□□□ -1.5
NFKB1P19838 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.65□□□□□ -1.5
NFKB1P19838 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.65□□□□□ -1.5
NFKB1P19838 MRPS21P7-201ENST00000566937 238 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.65□□□□□ -1.5
NFKB1P19838 AC012443.1-201ENST00000605605 231 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 AL590099.1-201ENST00000615276 138 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 ATP5A1P2-202ENST00000616464 443 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 MIR6133-201ENST00000617057 108 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 MIR6778-201ENST00000617912 73 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 AC103710.2-202ENST00000641454 2853 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.65□□□□□ -1.5
NFKB1P19838 AC140134.1-201ENST00000511830 3544 ntBASIC5.65□□□□□ -1.5
NFKB1P19838 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NFKB1P19838 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
NFKB1P19838 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NFKB1P19838 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NFKB1P19838 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NFKB1P19838 MTND5P27-201ENST00000428871 1720 ntBASIC5.65□□□□□ -1.51
NFKB1P19838 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.65□□□□□ -1.51
NFKB1P19838 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NFKB1P19838 AC097063.1-201ENST00000426714 1797 ntBASIC5.65□□□□□ -1.51
NFKB1P19838 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
NFKB1P19838 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
NFKB1P19838 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
NFKB1P19838 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NFKB1P19838 ZNF734P-201ENST00000419494 1534 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NFKB1P19838 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.64□□□□□ -1.51
NFKB1P19838 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NFKB1P19838 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NFKB1P19838 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NFKB1P19838 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.64□□□□□ -1.51
NFKB1P19838 RN7SKP145-201ENST00000363291 303 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 RNA5SP510-201ENST00000364697 99 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 SNORD82-201ENST00000365530 70 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
NFKB1P19838 Y_RNA.389-201ENST00000383924 113 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 SNORA70.6-201ENST00000383934 134 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 DBIP1-201ENST00000401435 260 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 AL049697.2-201ENST00000403708 294 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 RNU6-1050P-201ENST00000410388 107 ntBASIC5.64□□□□□ -1.51
NFKB1P19838 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NFKB1P19838 GJA6P-201ENST00000415117 1042 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms