Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC010297.1-201ENST00000623948 149 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HMGA1P17096 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HMGA1P17096 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.37□□□□□ -2.03
HMGA1P17096 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
HMGA1P17096 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HMGA1P17096 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.36□□□□□ -2.03
HMGA1P17096 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGA1P17096 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.36□□□□□ -2.03
HMGA1P17096 AC097714.1-201ENST00000511272 1647 ntBASIC2.36□□□□□ -2.03
HMGA1P17096 MIR221-201ENST00000385135 110 ntBASIC2.36□□□□□ -2.03
HMGA1P17096 RAD23BP2-201ENST00000416003 1207 ntBASIC2.36□□□□□ -2.03
HMGA1P17096 AC099336.2-201ENST00000422457 254 ntBASIC2.36□□□□□ -2.03
HMGA1P17096 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGA1P17096 AC092427.1-202ENST00000430569 476 ntBASIC2.36□□□□□ -2.03
HMGA1P17096 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGA1P17096 SNRPFP2-201ENST00000440710 251 ntBASIC2.36□□□□□ -2.03
HMGA1P17096 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGA1P17096 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGA1P17096 RPL23AP23-201ENST00000452590 471 ntBASIC2.36□□□□□ -2.03
HMGA1P17096 snoU13.26-201ENST00000459452 105 ntBASIC2.36□□□□□ -2.03
HMGA1P17096 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HMGA1P17096 OR4G11P-201ENST00000492842 939 ntBASIC2.36□□□□□ -2.03
HMGA1P17096 AC010265.1-201ENST00000513509 211 ntBASIC2.36□□□□□ -2.03
HMGA1P17096 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGA1P17096 IGKV3-31-201ENST00000523109 329 ntBASIC2.36□□□□□ -2.03
HMGA1P17096 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGA1P17096 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGA1P17096 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGA1P17096 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.36□□□□□ -2.03
HMGA1P17096 TUG1_1.1-201ENST00000610654 145 ntBASIC2.36□□□□□ -2.03
HMGA1P17096 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGA1P17096 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
HMGA1P17096 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HMGA1P17096 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HMGA1P17096 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HMGA1P17096 AC004925.1-201ENST00000624256 2706 ntBASIC2.36□□□□□ -2.03
HMGA1P17096 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HMGA1P17096 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGA1P17096 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HMGA1P17096 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HMGA1P17096 SNORA25.6-201ENST00000364121 118 ntBASIC2.35□□□□□ -2.03
HMGA1P17096 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HMGA1P17096 BTBD10P2-201ENST00000404779 676 ntBASIC2.35□□□□□ -2.03
HMGA1P17096 RNU4-26P-201ENST00000410270 107 ntBASIC2.35□□□□□ -2.03
HMGA1P17096 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGA1P17096 BX276092.3-201ENST00000424182 230 ntBASIC2.35□□□□□ -2.03
HMGA1P17096 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGA1P17096 RPL21P2-201ENST00000440049 481 ntBASIC2.35□□□□□ -2.03
HMGA1P17096 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGA1P17096 TBCAP3-201ENST00000512475 312 ntBASIC2.35□□□□□ -2.03
HMGA1P17096 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGA1P17096 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.35□□□□□ -2.03
HMGA1P17096 OR5D17P-201ENST00000531492 978 ntBASIC2.35□□□□□ -2.03
HMGA1P17096 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGA1P17096 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.35□□□□□ -2.03
HMGA1P17096 AL159169.2-201ENST00000610061 1269 ntBASIC2.35□□□□□ -2.03
HMGA1P17096 CYP3A51P-201ENST00000633513 256 ntBASIC2.35□□□□□ -2.03
HMGA1P17096 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGA1P17096 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.34□□□□□ -2.03
HMGA1P17096 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
HMGA1P17096 RPL21P132-201ENST00000331267 462 ntBASIC2.34□□□□□ -2.03
HMGA1P17096 OR5H15-201ENST00000383696 930 ntBASIC2.34□□□□□ -2.03
HMGA1P17096 TRIAP1P1-201ENST00000427062 225 ntBASIC2.34□□□□□ -2.03
HMGA1P17096 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGA1P17096 AC013410.1-201ENST00000436223 1232 ntBASIC2.34□□□□□ -2.03
HMGA1P17096 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.34□□□□□ -2.03
HMGA1P17096 RPL7P31-201ENST00000450192 724 ntBASIC2.34□□□□□ -2.03
HMGA1P17096 SNRPGP3-201ENST00000469405 227 ntBASIC2.34□□□□□ -2.03
HMGA1P17096 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.34□□□□□ -2.03
HMGA1P17096 AC092436.1-201ENST00000506450 503 ntBASIC2.34□□□□□ -2.03
HMGA1P17096 KLHL2P1-201ENST00000508691 521 ntBASIC2.34□□□□□ -2.03
HMGA1P17096 IGKV2-36-201ENST00000519999 223 ntBASIC2.34□□□□□ -2.03
HMGA1P17096 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.34□□□□□ -2.03
HMGA1P17096 AC084757.1-201ENST00000559987 490 ntBASIC2.34□□□□□ -2.03
HMGA1P17096 MAGOH2P-202ENST00000584384 429 ntBASIC2.34□□□□□ -2.03
HMGA1P17096 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.34□□□□□ -2.03
HMGA1P17096 AL645944.1-201ENST00000603857 493 ntBASIC2.34□□□□□ -2.03
HMGA1P17096 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.34□□□□□ -2.03
HMGA1P17096 AF127577.6-201ENST00000623352 2191 ntBASIC2.34□□□□□ -2.04
HMGA1P17096 MTND5P7-201ENST00000413558 1798 ntBASIC2.33□□□□□ -2.04
HMGA1P17096 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HMGA1P17096 RNU1-51P-201ENST00000365345 176 ntBASIC2.33□□□□□ -2.04
HMGA1P17096 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
HMGA1P17096 SNORA64-201ENST00000384674 134 ntBASIC2.33□□□□□ -2.04
HMGA1P17096 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.33□□□□□ -2.04
HMGA1P17096 AL354719.1-201ENST00000406535 843 ntBASIC2.33□□□□□ -2.04
HMGA1P17096 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.33□□□□□ -2.04
HMGA1P17096 PTGES3P5-201ENST00000455109 434 ntBASIC2.33□□□□□ -2.04
HMGA1P17096 RPL30P9-201ENST00000465586 330 ntBASIC2.33□□□□□ -2.04
HMGA1P17096 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.33□□□□□ -2.04
HMGA1P17096 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.33□□□□□ -2.04
HMGA1P17096 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.33□□□□□ -2.04
HMGA1P17096 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.33□□□□□ -2.04
HMGA1P17096 AC068313.1-201ENST00000604028 1008 ntBASIC2.33□□□□□ -2.04
HMGA1P17096 AL136981.2-201ENST00000617319 734 ntBASIC2.33□□□□□ -2.04
HMGA1P17096 MIR6873-201ENST00000622788 63 ntBASIC2.33□□□□□ -2.04
HMGA1P17096 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HMGA1P17096 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
HMGA1P17096 AC021755.1-201ENST00000559747 1447 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms