Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC106785.1-201ENST00000565935 262 ntBASIC1.97□□□□□ -2.09
SIX6O95475 MIR4700-201ENST00000578311 74 ntBASIC1.97□□□□□ -2.09
SIX6O95475 MIR5694-201ENST00000581190 76 ntBASIC1.97□□□□□ -2.09
SIX6O95475 SNORD84-203ENST00000584275 78 ntBASIC1.97□□□□□ -2.09
SIX6O95475 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC1.97□□□□□ -2.09
SIX6O95475 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.97□□□□□ -2.09
SIX6O95475 AC112503.2-201ENST00000609005 552 ntBASIC1.97□□□□□ -2.09
SIX6O95475 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.97□□□□□ -2.09
SIX6O95475 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SIX6O95475 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SIX6O95475 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SIX6O95475 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.96□□□□□ -2.1
SIX6O95475 RNA5SP374-201ENST00000362939 125 ntBASIC1.96□□□□□ -2.1
SIX6O95475 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SIX6O95475 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SIX6O95475 AL138880.1-201ENST00000405824 642 ntBASIC1.96□□□□□ -2.1
SIX6O95475 RNA5SP338-201ENST00000410495 85 ntBASIC1.96□□□□□ -2.1
SIX6O95475 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SIX6O95475 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC1.96□□□□□ -2.1
SIX6O95475 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.96□□□□□ -2.1
SIX6O95475 HMGN2P38-201ENST00000423806 265 ntBASIC1.96□□□□□ -2.1
SIX6O95475 RPL21P66-201ENST00000426566 466 ntBASIC1.96□□□□□ -2.1
SIX6O95475 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SIX6O95475 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.96□□□□□ -2.1
SIX6O95475 AC103987.1-201ENST00000473394 348 ntBASIC1.96□□□□□ -2.1
SIX6O95475 AL133372.1-201ENST00000493565 745 ntBASIC1.96□□□□□ -2.1
SIX6O95475 ENSA-210ENST00000503241 574 ntTSL 3 BASIC1.96□□□□□ -2.1
SIX6O95475 AC009901.1-201ENST00000506703 541 ntBASIC1.96□□□□□ -2.1
SIX6O95475 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.96□□□□□ -2.1
SIX6O95475 MTCO2P32-201ENST00000514865 403 ntBASIC1.96□□□□□ -2.1
SIX6O95475 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.96□□□□□ -2.1
SIX6O95475 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.96□□□□□ -2.1
SIX6O95475 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.96□□□□□ -2.1
SIX6O95475 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.96□□□□□ -2.1
SIX6O95475 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC1.96□□□□□ -2.1
SIX6O95475 VN1R78P-201ENST00000597393 564 ntBASIC1.96□□□□□ -2.1
SIX6O95475 ELOCP35-201ENST00000604289 336 ntBASIC1.96□□□□□ -2.1
SIX6O95475 AC067747.1-201ENST00000608026 250 ntBASIC1.96□□□□□ -2.1
SIX6O95475 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.96□□□□□ -2.1
SIX6O95475 MIR7975-201ENST00000619350 68 ntBASIC1.96□□□□□ -2.1
SIX6O95475 AC002064.3-201ENST00000623448 346 ntBASIC1.96□□□□□ -2.1
SIX6O95475 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC1.96□□□□□ -2.1
SIX6O95475 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.96□□□□□ -2.1
SIX6O95475 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SIX6O95475 AC010680.1-201ENST00000590024 3590 ntBASIC1.96□□□□□ -2.1
SIX6O95475 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.96□□□□□ -2.1
SIX6O95475 MTCO1P8-201ENST00000416914 1523 ntBASIC1.96□□□□□ -2.1
SIX6O95475 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SIX6O95475 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.95□□□□□ -2.1
SIX6O95475 AC097714.1-201ENST00000511272 1647 ntBASIC1.95□□□□□ -2.1
SIX6O95475 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SIX6O95475 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
SIX6O95475 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SIX6O95475 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.95□□□□□ -2.1
SIX6O95475 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SIX6O95475 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SIX6O95475 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SIX6O95475 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.95□□□□□ -2.1
SIX6O95475 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC1.95□□□□□ -2.1
SIX6O95475 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC1.95□□□□□ -2.1
SIX6O95475 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC1.95□□□□□ -2.1
SIX6O95475 RNU6-717P-201ENST00000459076 104 ntBASIC1.95□□□□□ -2.1
SIX6O95475 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.95□□□□□ -2.1
SIX6O95475 AC090515.1-201ENST00000465295 476 ntBASIC1.95□□□□□ -2.1
SIX6O95475 RPL23AP45-201ENST00000476406 468 ntBASIC1.95□□□□□ -2.1
SIX6O95475 MRPL42P6-201ENST00000486397 371 ntBASIC1.95□□□□□ -2.1
SIX6O95475 LINC00888-204ENST00000487386 421 ntBASIC1.95□□□□□ -2.1
SIX6O95475 AC090096.1-201ENST00000489168 390 ntBASIC1.95□□□□□ -2.1
SIX6O95475 HMGB1P38-201ENST00000490557 577 ntBASIC1.95□□□□□ -2.1
SIX6O95475 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.95□□□□□ -2.1
SIX6O95475 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.95□□□□□ -2.1
SIX6O95475 RPL23AP84-201ENST00000571193 464 ntBASIC1.95□□□□□ -2.1
SIX6O95475 MIR4448-201ENST00000584360 86 ntBASIC1.95□□□□□ -2.1
SIX6O95475 AC093227.2-201ENST00000589357 285 ntBASIC1.95□□□□□ -2.1
SIX6O95475 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC1.95□□□□□ -2.1
SIX6O95475 AC010620.2-201ENST00000600135 313 ntBASIC1.95□□□□□ -2.1
SIX6O95475 AC068831.8-201ENST00000620171 435 ntBASIC1.95□□□□□ -2.1
SIX6O95475 AC103798.2-201ENST00000624292 632 ntBASIC1.95□□□□□ -2.1
SIX6O95475 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SIX6O95475 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC1.94□□□□□ -2.1
SIX6O95475 SNORD114-30-201ENST00000364448 72 ntBASIC1.94□□□□□ -2.1
SIX6O95475 RNU6-335P-201ENST00000364563 113 ntBASIC1.94□□□□□ -2.1
SIX6O95475 RNA5SP267-201ENST00000364893 126 ntBASIC1.94□□□□□ -2.1
SIX6O95475 RNA5SP138-201ENST00000365098 114 ntBASIC1.94□□□□□ -2.1
SIX6O95475 AL138885.1-201ENST00000405921 675 ntBASIC1.94□□□□□ -2.1
SIX6O95475 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SIX6O95475 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.94□□□□□ -2.1
SIX6O95475 AL645937.1-202ENST00000421799 937 ntBASIC1.94□□□□□ -2.1
SIX6O95475 COTL1P1-201ENST00000422309 375 ntBASIC1.94□□□□□ -2.1
SIX6O95475 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.94□□□□□ -2.1
SIX6O95475 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.94□□□□□ -2.1
SIX6O95475 UBE2V1P1-201ENST00000430836 445 ntBASIC1.94□□□□□ -2.1
SIX6O95475 RPS24P13-201ENST00000442520 397 ntBASIC1.94□□□□□ -2.1
SIX6O95475 PRDX3P3-201ENST00000447765 522 ntBASIC1.94□□□□□ -2.1
SIX6O95475 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.94□□□□□ -2.1
SIX6O95475 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.94□□□□□ -2.1
SIX6O95475 RPL5P24-201ENST00000463742 885 ntBASIC1.94□□□□□ -2.1
SIX6O95475 RBM43P1-201ENST00000476891 1081 ntBASIC1.94□□□□□ -2.1
SIX6O95475 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SIX6O95475 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms