Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.28□□□□□ -2.04
HMGB3O15347 CUL1P1-201ENST00000509510 2425 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
HMGB3O15347 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HMGB3O15347 AL672167.1-206ENST00000356293 943 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 RNA5SP139-201ENST00000364340 117 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 MIR144-201ENST00000384886 86 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 MIR512-1-201ENST00000384913 84 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 RNA5SP252-201ENST00000391131 119 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
HMGB3O15347 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HMGB3O15347 RN7SKP159-201ENST00000410657 292 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 RPL7P8-201ENST00000411964 730 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 RAB9AP3-201ENST00000412737 573 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 RPS29P4-201ENST00000414733 161 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 RPS7P15-201ENST00000415804 584 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 FO393419.3-201ENST00000428741 282 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGB3O15347 RPL36AP6-201ENST00000435770 321 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.28□□□□□ -2.04
HMGB3O15347 AC091862.1-201ENST00000438016 1100 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGB3O15347 RAB9AP1-201ENST00000449393 573 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 RN7SL863P-201ENST00000462370 296 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 AC090525.1-201ENST00000479116 478 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 AC103975.1-201ENST00000482506 483 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 SRIP1-201ENST00000489235 288 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 OR2A20P-203ENST00000498397 1268 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGB3O15347 HMGN1P15-201ENST00000513870 295 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 RPPH1-2P-201ENST00000516688 293 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 AC026241.1-201ENST00000517873 2142 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HMGB3O15347 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.28□□□□□ -2.04
HMGB3O15347 AP000857.1-201ENST00000532151 543 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGB3O15347 AC005412.1-201ENST00000580812 1049 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 AC015871.2-201ENST00000603605 948 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGB3O15347 AL355493.4-201ENST00000618530 292 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 AC103798.2-201ENST00000624292 632 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 AC139713.2-210ENST00000641741 992 ntBASIC2.28□□□□□ -2.04
HMGB3O15347 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HMGB3O15347 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
HMGB3O15347 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
HMGB3O15347 AC016716.1-201ENST00000265882 708 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HMGB3O15347 MIR6073-201ENST00000352083 89 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 OR5H2-201ENST00000355273 945 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 NACA3P-201ENST00000359690 648 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 MIR22-201ENST00000362190 85 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 ARF4P3-201ENST00000397387 509 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 CYCSP19-201ENST00000411715 316 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGB3O15347 AL513477.1-202ENST00000417061 214 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 RPF2P1-201ENST00000424137 906 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.27□□□□□ -2.05
HMGB3O15347 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.27□□□□□ -2.05
HMGB3O15347 AL645638.1-201ENST00000440519 361 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 MRPL50P4-201ENST00000446432 475 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 AL590664.1-201ENST00000448065 339 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 RPL23AP15-201ENST00000450202 459 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 MRPL35P4-201ENST00000453682 566 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGB3O15347 SETP11-201ENST00000473027 690 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 AP001025.2-201ENST00000490908 477 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HMGB3O15347 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.27□□□□□ -2.05
HMGB3O15347 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.27□□□□□ -2.05
HMGB3O15347 MTND3P24-201ENST00000506306 329 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGB3O15347 AC008885.2-201ENST00000509506 930 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.27□□□□□ -2.05
HMGB3O15347 AC010625.1-201ENST00000511296 403 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.27□□□□□ -2.05
HMGB3O15347 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.27□□□□□ -2.05
HMGB3O15347 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.27□□□□□ -2.05
HMGB3O15347 AC074029.2-201ENST00000551045 634 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 AC011611.1-201ENST00000552179 197 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGB3O15347 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.27□□□□□ -2.05
HMGB3O15347 AC006130.2-201ENST00000586202 326 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 AF230666.2-201ENST00000602328 725 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 AC024560.3-201ENST00000608482 349 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 AL161734.1-201ENST00000609720 557 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 AL355365.1-201ENST00000616480 294 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 AC138932.5-201ENST00000617759 563 ntBASIC2.27□□□□□ -2.05
HMGB3O15347 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGB3O15347 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGB3O15347 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGB3O15347 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGB3O15347 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGB3O15347 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HMGB3O15347 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGB3O15347 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HMGB3O15347 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
HMGB3O15347 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
HMGB3O15347 AC011460.1-201ENST00000636268 1834 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms