Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AL451074.6-201ENST00000608512 729 ntBASIC4.68□□□□□ -1.66
NPHP1O15259 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.68□□□□□ -1.66
NPHP1O15259 AL050303.3-201ENST00000613704 284 ntBASIC4.68□□□□□ -1.66
NPHP1O15259 MIR8058-201ENST00000615737 89 ntBASIC4.68□□□□□ -1.66
NPHP1O15259 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.68□□□□□ -1.66
NPHP1O15259 AC008725.1-201ENST00000605123 2263 ntBASIC4.68□□□□□ -1.66
NPHP1O15259 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.68□□□□□ -1.66
NPHP1O15259 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.68□□□□□ -1.66
NPHP1O15259 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPHP1O15259 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.68□□□□□ -1.66
NPHP1O15259 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.67□□□□□ -1.66
NPHP1O15259 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.67□□□□□ -1.66
NPHP1O15259 RNA5SP267-201ENST00000364893 126 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 AC097713.2-201ENST00000430199 356 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.67□□□□□ -1.66
NPHP1O15259 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.67□□□□□ -1.66
NPHP1O15259 AC092641.1-201ENST00000440229 772 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.67□□□□□ -1.66
NPHP1O15259 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.67□□□□□ -1.66
NPHP1O15259 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.67□□□□□ -1.66
NPHP1O15259 RPL18AP17-201ENST00000455326 198 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 BTF3P5-201ENST00000457252 467 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 AC017015.1-201ENST00000477387 286 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 RPL7P38-201ENST00000488396 739 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.67□□□□□ -1.66
NPHP1O15259 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.67□□□□□ -1.66
NPHP1O15259 OR4P1P-201ENST00000530808 1136 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.67□□□□□ -1.66
NPHP1O15259 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.67□□□□□ -1.66
NPHP1O15259 NCAPGP2-201ENST00000557911 754 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 HSPE1P3-201ENST00000559254 309 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.67□□□□□ -1.66
NPHP1O15259 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.67□□□□□ -1.66
NPHP1O15259 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.67□□□□□ -1.66
NPHP1O15259 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.67□□□□□ -1.66
NPHP1O15259 XIAPP1-201ENST00000603162 600 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 AC128687.1-201ENST00000605304 619 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 AC005000.2-201ENST00000605468 310 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 AC069209.1-201ENST00000619282 651 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 AC109809.1-201ENST00000619665 545 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 AL359715.5-201ENST00000623431 443 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 AC091925.2-201ENST00000625059 256 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.67□□□□□ -1.66
NPHP1O15259 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.67□□□□□ -1.66
NPHP1O15259 MIR4278-201ENST00000636094 69 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 AC244517.1-201ENST00000606030 2086 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPHP1O15259 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPHP1O15259 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.67□□□□□ -1.66
NPHP1O15259 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
NPHP1O15259 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.67□□□□□ -1.66
NPHP1O15259 AP001350.1-201ENST00000601906 1524 ntBASIC4.67□□□□□ -1.66
NPHP1O15259 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.66□□□□□ -1.66
NPHP1O15259 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPHP1O15259 RNU6-600P-201ENST00000362524 99 ntBASIC4.66□□□□□ -1.66
NPHP1O15259 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.66□□□□□ -1.66
NPHP1O15259 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.66□□□□□ -1.66
NPHP1O15259 GLRXP1-201ENST00000423261 334 ntBASIC4.66□□□□□ -1.66
NPHP1O15259 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.66□□□□□ -1.66
NPHP1O15259 RPL23AP74-201ENST00000437246 471 ntBASIC4.66□□□□□ -1.66
NPHP1O15259 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.66□□□□□ -1.66
NPHP1O15259 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.66□□□□□ -1.66
NPHP1O15259 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.66□□□□□ -1.66
NPHP1O15259 RPS24P6-201ENST00000452670 400 ntBASIC4.66□□□□□ -1.66
NPHP1O15259 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.66□□□□□ -1.66
NPHP1O15259 snoU109.4-201ENST00000458953 143 ntBASIC4.66□□□□□ -1.66
NPHP1O15259 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.66□□□□□ -1.66
NPHP1O15259 SETP14-201ENST00000497538 873 ntBASIC4.66□□□□□ -1.66
NPHP1O15259 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.66□□□□□ -1.66
NPHP1O15259 RN7SKP244-201ENST00000516513 307 ntBASIC4.66□□□□□ -1.66
NPHP1O15259 SNORA31.20-201ENST00000517111 133 ntBASIC4.66□□□□□ -1.66
NPHP1O15259 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.66□□□□□ -1.66
NPHP1O15259 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.66□□□□□ -1.66
NPHP1O15259 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.66□□□□□ -1.66
NPHP1O15259 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.66□□□□□ -1.66
NPHP1O15259 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.66□□□□□ -1.66
NPHP1O15259 DUXAP3-201ENST00000603616 594 ntBASIC4.66□□□□□ -1.66
NPHP1O15259 AC018755.4-201ENST00000619715 454 ntBASIC4.66□□□□□ -1.66
NPHP1O15259 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.66□□□□□ -1.66
NPHP1O15259 AC090897.3-201ENST00000636973 1157 ntBASIC4.66□□□□□ -1.66
NPHP1O15259 AC095050.2-201ENST00000510748 1458 ntBASIC4.66□□□□□ -1.66
NPHP1O15259 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPHP1O15259 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.66□□□□□ -1.66
NPHP1O15259 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.66□□□□□ -1.66
NPHP1O15259 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPHP1O15259 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPHP1O15259 GABPAP-201ENST00000419271 1356 ntBASIC4.65□□□□□ -1.66
NPHP1O15259 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPHP1O15259 AP002907.1-201ENST00000606361 1430 ntBASIC4.65□□□□□ -1.66
NPHP1O15259 AC027287.1-201ENST00000553115 1453 ntBASIC4.65□□□□□ -1.66
NPHP1O15259 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
NPHP1O15259 RNU6-621P-201ENST00000364752 109 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 RNA5SP235-201ENST00000365411 114 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 Y_RNA.465-201ENST00000384293 102 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 RNU6-1122P-201ENST00000384449 107 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 RNU6-878P-201ENST00000384578 110 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 RNU2-37P-201ENST00000410695 177 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.65□□□□□ -1.67
NPHP1O15259 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.65□□□□□ -1.67
NPHP1O15259 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms