Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC245166.1-201ENST00000521012 253 ntBASIC4.58□□□□□ -1.68
CUX2O14529 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.58□□□□□ -1.68
CUX2O14529 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
CUX2O14529 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.58□□□□□ -1.68
CUX2O14529 AC006111.3-201ENST00000622137 383 ntBASIC4.58□□□□□ -1.68
CUX2O14529 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CUX2O14529 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CUX2O14529 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC4.58□□□□□ -1.68
CUX2O14529 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.58□□□□□ -1.68
CUX2O14529 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.58□□□□□ -1.68
CUX2O14529 RPS20P25-201ENST00000412447 352 ntBASIC4.57□□□□□ -1.68
CUX2O14529 RPL31P45-201ENST00000419532 356 ntBASIC4.57□□□□□ -1.68
CUX2O14529 AL606490.7-201ENST00000433136 191 ntBASIC4.57□□□□□ -1.68
CUX2O14529 AC108120.2-201ENST00000512973 294 ntBASIC4.57□□□□□ -1.68
CUX2O14529 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.57□□□□□ -1.68
CUX2O14529 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.57□□□□□ -1.68
CUX2O14529 AC009101.1-201ENST00000568135 242 ntBASIC4.57□□□□□ -1.68
CUX2O14529 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC4.57□□□□□ -1.68
CUX2O14529 AC009032.1-201ENST00000617574 431 ntBASIC4.57□□□□□ -1.68
CUX2O14529 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CUX2O14529 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CUX2O14529 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CUX2O14529 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CUX2O14529 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CUX2O14529 Y_RNA.122-201ENST00000363331 96 ntBASIC4.56□□□□□ -1.68
CUX2O14529 RNU6-666P-201ENST00000363499 107 ntBASIC4.56□□□□□ -1.68
CUX2O14529 SNORA27.3-201ENST00000364937 134 ntBASIC4.56□□□□□ -1.68
CUX2O14529 RNU6-532P-201ENST00000384318 107 ntBASIC4.56□□□□□ -1.68
CUX2O14529 RNU6-225P-201ENST00000384613 103 ntBASIC4.56□□□□□ -1.68
CUX2O14529 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.56□□□□□ -1.68
CUX2O14529 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.56□□□□□ -1.68
CUX2O14529 AC003982.1-202ENST00000469928 248 ntBASIC4.56□□□□□ -1.68
CUX2O14529 AC108471.1-201ENST00000513977 287 ntBASIC4.56□□□□□ -1.68
CUX2O14529 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.56□□□□□ -1.68
CUX2O14529 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.56□□□□□ -1.68
CUX2O14529 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.56□□□□□ -1.68
CUX2O14529 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.56□□□□□ -1.68
CUX2O14529 AC020658.4-201ENST00000613987 684 ntBASIC4.56□□□□□ -1.68
CUX2O14529 RPL23AP61-201ENST00000623642 466 ntBASIC4.56□□□□□ -1.68
CUX2O14529 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.56□□□□□ -1.68
CUX2O14529 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.56□□□□□ -1.68
CUX2O14529 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CUX2O14529 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CUX2O14529 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CUX2O14529 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.56□□□□□ -1.68
CUX2O14529 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CUX2O14529 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CUX2O14529 AC004972.1-201ENST00000623934 2209 ntBASIC4.56□□□□□ -1.68
CUX2O14529 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CUX2O14529 AL590623.1-201ENST00000427864 105 ntBASIC4.56□□□□□ -1.68
CUX2O14529 AC105402.2-201ENST00000438503 358 ntBASIC4.56□□□□□ -1.68
CUX2O14529 AL354710.1-201ENST00000453641 246 ntBASIC4.56□□□□□ -1.68
CUX2O14529 RN7SL75P-201ENST00000461926 281 ntBASIC4.56□□□□□ -1.68
CUX2O14529 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.56□□□□□ -1.68
CUX2O14529 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.56□□□□□ -1.68
CUX2O14529 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.56□□□□□ -1.68
CUX2O14529 AP003102.1-201ENST00000525638 661 ntBASIC4.56□□□□□ -1.68
CUX2O14529 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.56□□□□□ -1.68
CUX2O14529 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CUX2O14529 AL391834.1-201ENST00000609609 560 ntBASIC4.56□□□□□ -1.68
CUX2O14529 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.56□□□□□ -1.68
CUX2O14529 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CUX2O14529 BX005019.1-201ENST00000561881 1810 ntBASIC4.55□□□□□ -1.68
CUX2O14529 AC004520.1-201ENST00000608362 1413 ntBASIC4.55□□□□□ -1.68
CUX2O14529 AC011460.1-201ENST00000636268 1834 ntBASIC4.55□□□□□ -1.68
CUX2O14529 RAD1P1-201ENST00000231383 813 ntBASIC4.55□□□□□ -1.68
CUX2O14529 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CUX2O14529 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CUX2O14529 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.55□□□□□ -1.68
CUX2O14529 NDUFA5P10-201ENST00000432147 357 ntBASIC4.55□□□□□ -1.68
CUX2O14529 AC112220.1-201ENST00000434628 355 ntBASIC4.55□□□□□ -1.68
CUX2O14529 SUMO1P1-201ENST00000497904 306 ntBASIC4.55□□□□□ -1.68
CUX2O14529 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CUX2O14529 AC117522.2-201ENST00000510049 657 ntBASIC4.55□□□□□ -1.68
CUX2O14529 OR4U1P-201ENST00000554958 912 ntBASIC4.55□□□□□ -1.68
CUX2O14529 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.55□□□□□ -1.68
CUX2O14529 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.55□□□□□ -1.68
CUX2O14529 AC110994.2-201ENST00000635481 492 ntBASIC4.55□□□□□ -1.68
CUX2O14529 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.55□□□□□ -1.68
CUX2O14529 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
CUX2O14529 BTF3P7-201ENST00000407097 488 ntBASIC4.54□□□□□ -1.68
CUX2O14529 RNA5SP498-201ENST00000411342 120 ntBASIC4.54□□□□□ -1.68
CUX2O14529 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.54□□□□□ -1.68
CUX2O14529 AC007064.1-201ENST00000412238 351 ntBASIC4.54□□□□□ -1.68
CUX2O14529 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.54□□□□□ -1.68
CUX2O14529 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.54□□□□□ -1.68
CUX2O14529 AC114878.1-201ENST00000441166 358 ntBASIC4.54□□□□□ -1.68
CUX2O14529 AL157827.1-201ENST00000447622 132 ntBASIC4.54□□□□□ -1.68
CUX2O14529 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CUX2O14529 AC135803.1-201ENST00000608748 565 ntBASIC4.54□□□□□ -1.68
CUX2O14529 AL136981.2-201ENST00000617319 734 ntBASIC4.54□□□□□ -1.68
CUX2O14529 AC009039.2-201ENST00000624524 529 ntBASIC4.54□□□□□ -1.68
CUX2O14529 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CUX2O14529 AC008264.2-201ENST00000610193 3731 ntBASIC4.53□□□□□ -1.68
CUX2O14529 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.53□□□□□ -1.68
CUX2O14529 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CUX2O14529 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CUX2O14529 RPL21P3-201ENST00000395517 478 ntBASIC4.53□□□□□ -1.68
CUX2O14529 RPL31P1-201ENST00000398116 372 ntBASIC4.53□□□□□ -1.68
CUX2O14529 MTND3P20-201ENST00000407663 186 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms